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Report for CCDS39618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39618.1 Public Mus musculus 6 Mug1 23 108 98 CCDS HistoryNCBI Gene:17836Re-query CCDS DB by CCDS ID:39618.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39618.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032228.8 ENSMUSP00000032228.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032228.8Link to Ensembl Protein Viewer:ENSMUSP00000032228.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032228Re-query CCDS DB by Protein ID:ENSMUSP00000032228
Original member Current member NCBI NM_008645.3 NP_032671.2 Accepted alive Link to Nucleotide Sequence:NM_008645.3Link to Protein Sequence:NP_032671.2Re-query CCDS DB by Nucleotide ID:NM_008645Re-query CCDS DB by Protein ID:NP_032671Link to BLAST:NP_032671.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032671.2 1476 P28665 1476 100% 0 0

Chromosomal Locations for CCDS 39618.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 121838639 121838724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121840060 121840243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121841002 121841161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121841272 121841324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121849446 121849466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121849724 121849892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121850270 121850354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121851389 121851476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121856284 121856401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121856546 121856655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121857336 121857497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121861049 121861276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121861504 121861567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121863721 121863869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121865734 121865883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121870492 121870650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121871305 121871386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121873615 121873792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121874392 121874620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121875430 121875556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121875816 121875937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121876420 121876471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121878485 121878568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121878911 121879087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121879300 121879387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121880444 121880600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121880832 121880906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121881682 121881862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121882582 121882805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121884184 121884402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121884562 121884689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121885804 121885894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121886545 121886613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121887415 121887517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121888563 121888604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121888913 121888929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4431 nt):
ATGTGGAAGAGCAGACGGGCTCAGTTGTGCCTTTTTTCGGTTCTCCTTGCCTTCCTGCATTCTGCTTCTT
TACTCAACGGAGACTCGAAGTATATGGTGCTGGTCCCTTCTCAGCTCTACACTGAGACCCCTGAGAAAAT
CTGCCTCCATCTATACCAGCTGAATGAAACAGTGACCGTCACAGCTTCCTTGGTATCTCAATCAGGAAGG
AAAAACCTGTTCGATGAGCTGGTGCTTGACAAGGACTTGTTCCAATGTGTTTCCTTCATTATCCCTAGAC
TCTCCTCTTCTGATGAGGAGGATTTTCTCTACGTGGACATCAAAGGGCCAACCCACGAATTCAGCAAAAG
GAAAGCAGTGCTTGTGAAGAACAAAGAAAGTGTTGTCTTTGTGCAGACAGATAAGCCCGTGTACAAGCCA
GGACAATCAGTTAAATTTCGGGTTGTCTCTATGGATAAAATGCTACGTCCCCTGAATGAGTTGCTTCCTC
TGGCTTACATTGAGGATCCGAAAAAGAACCGAATTATGCAGTGGAGGGATATTAAGACTGAGAATGGGCT
TAAGCAAATGTCCTTCAGCCTGGCAGCAGAGCCCATTCAGGGCCCCTACAAGATAGTGGTGCACAAAGAG
TCAGGGGAGAAGGAAGAACACTCCTTTACTGTGATGGAATTTGTGCTTCCCAGATTTAATGTCGACCTGA
AGGTCCCAAATGCCATGTCTGTGAATGATGAAGTGCTCAGTGTGACTGCATGTGGGAAATATACCTATGG
GAAGCCTGTTCCAGGACATGTGAAGATAAACGTCTGCCGTGAGACTGAGACTGGATGCAGAGAAGTCAAT
TCTCAGCTAGACAACAATGGCTGCAGTACACAAGAAGTGAACATCACTGAGCTCCAATCAAAGAAAAGGA
ATTATGAGGTTCAGCTTTTCCATGTGAATGCAACTGTTACAGAAGAAGGGACAGGATTGGAGTTCAGTCG
ATCTGGAACAACTAAAATTGAAAGAATCACAAACAAGCTCATATTTCTGAAGGCAGATTCACACTTCAGA
CATGGAATTCCATTCTTTGTGAAAGTCCGCCTAGTGGATATCAAGGGAGACCCTATCCCAAATGAGAAAG
TCTTCATCAAAGCACAAGAACTTAGCTATACCAGTGCTACTACCACTGATCAGCATGGCCTGGCAGAGTT
CTCCATAGATACCACATGCATCTCGGGCTCTTCCCTCCATATCAAAGTCAACCACAAAGAGGAAGATTCA
TGTTCCTATTTCTATTGCATGGAGGAAAGACATGCAAGTGCAAAGCATGTGGCCTATGCTGTTTACTCCC
TCAGCAAGAGCTACATCTACCTTGACACAGAGACCAGCAGCATCTTGCCCTGCAACCAGATTCACACAGT
TCAGGCACATTTTATTCTGAAGGGGGACTTGGGAGTGCTGAAAGAGCTCATTTTCTACTACCTGGTCATG
GCGCAGGGAAGCATCATCCAGACTGGAAACCATACTCACCAGGTGGAGCCAGGAGAAGCTCCAGTAAAAG
GAAAATTTGCCTTGGAGATCCCTGTGGAGTTTAGCATGGTCCCCATGGCTAAAATGCTCATCTACACGAT
CTTGCCTGATGGAGAAGTGATTGCAGATTCTGTAAACTTTGAAATTGAAAAGTGTCTTCGCAACAAAGTG
GACCTGCGCTTCAGCACTTCTCAAAGTCTTCCCGCCTCACAAACCCGTCTGCAGGTCACAGCTTCTCCTC
AGTCCCTCTGTGGCCTGAGAGCTGTGGACCAGAGTGTGCTACTCCTGAAACCCGAGTCTGAGCTCTCCCC
TTCCTGGATATACAATCTGCCAGGTATGCAGCAAAACAAATTCGTTCCAAGTTCCCGTCTGTCTGAAGAC
CAAGAAGACTGTATACTGTACAGTTCATGGTTGGCTGAGAAGCACACAAACTTAGTACCACATGGAACTG
AGAAGGATGTCTATAGATATGTGGAGGACATGGGTTTAACAGCATTCACCAACTTGATGATCAAACTTCC
TATAATTTGTTTTGACTATGGCATGGTTCCAATATCAGCACCTCGTGTGGAATTTGATCTTGCATTTACC
CCTGAAATTTCTTGGAGTTTACGCACAACATTGAGTAAAAGACCTGAAGAGCCACCACGTAAAGATCCAT
CATCGAATGATCCACTTACAGAGACCATTCGAAAATATTTTCCTGAAACCTGGGTCTGGGATATAGTCAC
AGTAAACTCCACAGGACTGGCTGAAGTGGAAATGACTGTCCCTGACACCATCACTGAATGGAAGGCAGGA
GCTCTCTGCTTGTCCAATGACACTGGCCTTGGCCTCTCTTCTGTGGTACCTCTCCAAGCCTTCAAGCCCT
TCTTTGTGGAGGTCTCATTGCCCTATTCTGTGGTCCGTGGAGAAGCCTTCATGCTCAAGGCCACTGTGAT
GAACTATCTCCCCACAAGCATGCAGATGAGTGTGCAGCTGGAAGCCTCTCCTGATTTCACAGCTGTCCCA
GTGGGAGACGACCAAGATTCTTACTGCCTCAGTGCCAATGGGAGGCACACCTCATCCTGGCTGGTAACTC
CCAAGTCTTTAGGGAATGTGAATTTCTCTGTGTCTGCGGAAGCACAACAGTCCTCAGAGCCCTGTGGTTC
TGAGGTGGCCACAGTTCCTGAAACTGGGAGAAAGGACACAGTAGTCAAAGTCCTGATAGTTGAGCCTGAA
GGAATCAAGCAAGAGCATACCTTCAGCTCACTGTTCTGTGCATCAGATGCTGAGATATCTGAAAAAATGT
CCCTGGTCCTCCCACCAACAGTAGTGAAAGATTCAGCAAGAGCCCATTTCTCTGTGATGGGTGATATCTT
GAGTTCAGCCATAAGAAACACACAAAACCTTCTCCATATGCCCTATGGCTGTGGGGAGCAGAACATGGTC
CTTTTTGCTCCCAACATCTACGTACTGAAATATCTGAATGAAACCCAACAGCTGACTCAGAAGATCAAGA
CTAAAGCCCTTGGGTTCCTCAGAGCTGGTTATCAGAGAGAGCTGAACTACAAACACAAGGATGGCTCCTA
CAGTGCCTTCGGGGATCAAAATGGCGAAAGAGAAGGAAACACTTGGCTCACAGCCTTTGTGCTCAAGTCT
TTTGCCCAAGCTCGAGCCTTCATCTTCATCGATGAATCACACATCACCCATGCCTTCACCTGGCTCTCCC
AAAAGCAGAAGGACAATGGCTGCTTCCGGAGCTCCGGATCATTGTTCAACAATGCCATGAAGGGGGGAGT
AGATGATGAAATGACCCTCTCTGCCTACATAACCATGGCCCTTCTGGAAAGTTCACTCCCAGCCACGCAT
CCTGTTGTCTCCAAAGCCCTGAGCTGCCTGGAGTCATCCTGGAAGACCATAGAACAAGAACGAAATGCCA
GCTTTGTGTACACCAAGGCTTTGATGGCCTATGCTTTTGCTCTGGCGGGGAACCAGAATAAGAGAGATGA
AATCCTGAAGTCACTTGATGAGGAAGCTATAAAAGAAAACAACTCTATCCACTGGAAAAGACCTCAGAAA
TCCAGGAAATCTGAACACCATTTGTACAAACCCCAGGCTTCCTCTGCTGAAGTAGAGATGAATGCATATG
TGGTCCTGGCTCGCCTCACTGCCCAGCCAGCCCCATCCCCTGAGGATCTGACTTTGTCAATGAGCACCAT
CATGTGGCTCACAAAGCAACAGAATTCCAATGGTGGCTTCTCCTCCACACAGGACACTGTGGTGGCCCTT
GATGCTCTGTCCAAATATGGAGCAGTGACTTTTTCGAGAAGTCAGAAAACGACTTTGGTGACTATCCAAT
CTACAGGGTCATTTTCCCAAAAGTTCCAAGTGGAGAACAGTAATCGCCTGTTACTACAGCAGGTCGCATT
ACCAGACATTCCTGGGGACTATACCATCAGTGTGTCAGGGGAAGGATGTGTGTATGCTCAGACTATGCTG
AGATACAACATGCACTTGGAGAAGCAGCTGTCTGCATTTGCTATATGGGTACAGACAGTACCTCTAACTT
GTAATAACCCCAAAGGCCACAACAGCTTCCAGATCTCACTAGAAATCAGTTACACAGGCAGCCGGCCAGC
CTCCAACATGGTGATTGCTGATGTGAAGATGCTATCTGGTTTCATCCCATTGAAACCAACAGTGAAAAAG
CTTGAAAGATTAGAGCACGTGAGCAGAACAGAAGTGAGCAACAACAATGTCTTAATATATTTGGATCAGG
TGACCAATCAGACACTGGCCTTCTCCTTCATCATTCAACAAGATATCCCAGTAAGGAACCTGCAGCCTGC
CATTGTGAAAGTCTATGACTACTATGAGACAGATGAAATGGCTTTTGCTGAATACAGCAGCCCCTGCAGC
ACAGACAAACAAAATGTTTGA

Translation (1476 aa):
MWKSRRAQLCLFSVLLAFLHSASLLNGDSKYMVLVPSQLYTETPEKICLHLYQLNETVTVTASLVSQSGR
KNLFDELVLDKDLFQCVSFIIPRLSSSDEEDFLYVDIKGPTHEFSKRKAVLVKNKESVVFVQTDKPVYKP
GQSVKFRVVSMDKMLRPLNELLPLAYIEDPKKNRIMQWRDIKTENGLKQMSFSLAAEPIQGPYKIVVHKE
SGEKEEHSFTVMEFVLPRFNVDLKVPNAMSVNDEVLSVTACGKYTYGKPVPGHVKINVCRETETGCREVN
SQLDNNGCSTQEVNITELQSKKRNYEVQLFHVNATVTEEGTGLEFSRSGTTKIERITNKLIFLKADSHFR
HGIPFFVKVRLVDIKGDPIPNEKVFIKAQELSYTSATTTDQHGLAEFSIDTTCISGSSLHIKVNHKEEDS
CSYFYCMEERHASAKHVAYAVYSLSKSYIYLDTETSSILPCNQIHTVQAHFILKGDLGVLKELIFYYLVM
AQGSIIQTGNHTHQVEPGEAPVKGKFALEIPVEFSMVPMAKMLIYTILPDGEVIADSVNFEIEKCLRNKV
DLRFSTSQSLPASQTRLQVTASPQSLCGLRAVDQSVLLLKPESELSPSWIYNLPGMQQNKFVPSSRLSED
QEDCILYSSWLAEKHTNLVPHGTEKDVYRYVEDMGLTAFTNLMIKLPIICFDYGMVPISAPRVEFDLAFT
PEISWSLRTTLSKRPEEPPRKDPSSNDPLTETIRKYFPETWVWDIVTVNSTGLAEVEMTVPDTITEWKAG
ALCLSNDTGLGLSSVVPLQAFKPFFVEVSLPYSVVRGEAFMLKATVMNYLPTSMQMSVQLEASPDFTAVP
VGDDQDSYCLSANGRHTSSWLVTPKSLGNVNFSVSAEAQQSSEPCGSEVATVPETGRKDTVVKVLIVEPE
GIKQEHTFSSLFCASDAEISEKMSLVLPPTVVKDSARAHFSVMGDILSSAIRNTQNLLHMPYGCGEQNMV
LFAPNIYVLKYLNETQQLTQKIKTKALGFLRAGYQRELNYKHKDGSYSAFGDQNGEREGNTWLTAFVLKS
FAQARAFIFIDESHITHAFTWLSQKQKDNGCFRSSGSLFNNAMKGGVDDEMTLSAYITMALLESSLPATH
PVVSKALSCLESSWKTIEQERNASFVYTKALMAYAFALAGNQNKRDEILKSLDEEAIKENNSIHWKRPQK
SRKSEHHLYKPQASSAEVEMNAYVVLARLTAQPAPSPEDLTLSMSTIMWLTKQQNSNGGFSSTQDTVVAL
DALSKYGAVTFSRSQKTTLVTIQSTGSFSQKFQVENSNRLLLQQVALPDIPGDYTISVSGEGCVYAQTML
RYNMHLEKQLSAFAIWVQTVPLTCNNPKGHNSFQISLEISYTGSRPASNMVIADVKMLSGFIPLKPTVKK
LERLEHVSRTEVSNNNVLIYLDQVTNQTLAFSFIIQQDIPVRNLQPAIVKVYDYYETDEMAFAEYSSPCS
TDKQNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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