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Report for CCDS21120.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21120.1 Public Mus musculus 7 Fam187b 23 108 98 CCDS HistoryNCBI Gene:76415Re-query CCDS DB by CCDS ID:21120.1Re-query CCDS DB by GeneID:76415See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21120.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058093.5 ENSMUSP00000057020.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058093.5Link to Ensembl Protein Viewer:ENSMUSP00000057020.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000058093Re-query CCDS DB by Protein ID:ENSMUSP00000057020
Original member NCBI NM_175240.4 NP_780449.2 Updated not alive Link to Nucleotide Sequence:NM_175240.4Link to Protein Sequence:NP_780449.2Re-query CCDS DB by Nucleotide ID:NM_175240Re-query CCDS DB by Protein ID:NP_780449
Current member NCBI NM_175240.5 NP_780449.2 Accepted alive Link to Nucleotide Sequence:NM_175240.5Link to Protein Sequence:NP_780449.2Re-query CCDS DB by Nucleotide ID:NM_175240Re-query CCDS DB by Protein ID:NP_780449Link to BLAST:NP_780449.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780449.2 358 Q0VAY3-1 358 100% 0 0

Chromosomal Locations for CCDS 21120.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30977068 30977780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30988980 30989343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGCTGGCTACTCTGTGGCTGGTTGGTCTTTCTCTTCCCATGCTGTGGGCCCAGAGACTAATCAGCTGTC
CCTACAAGAATGTGTGTCAGTATGCCCTGCTCTCAGGCAGTGACGTGATACTGCAGTGTAACTACCCCAA
AGCACTTTGGTATTTTTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGG
GTACTGCCTGGGAGCGACCTGCAGTTGTCTGACCCTAAGCCTTCCCAGACAGGCCTCTACCGCTGCCTGG
ATAATCACAAGGCCCGTTTGGTAGAATATGAGATTGACTTTCAGAACATAGCTCTGTTGCACATCACTCA
CAAAGACCTGGGCCAAGAGCCCATGGGAAATGAGAGCATGAACCTGGGAGGCAAGGTTCTTGTTTTTACC
CGCTGGGATCCTTGGCAAGATTGTAACCGTTGCCAAAAGCCAGGTGAGCGCAAACGTCTAGGCTACTGCT
ATGTGGAGGAGCCCCAAGAAAAGCCCATGCCTTGCTGGCTCTACCTGAGAGAGGAGAAGGTGACCAACAG
CCGCCTGAGGCCTGAACTCCAGCTACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAG
CCGTACTTTGTCTTTGACACATATCTGCTGGACAAACCCAACAGCAATGCTCGACTCAAGTGTCCCTTGG
CTTCCATCTACAGGCCTGTCCACTGGGAAGCTGACAACAGCCCTCTGACATGGCAGGACCAGCTCTCTGG
CCAGACGGTCAGCACCATCATGGACCTGCACAGTGGTGGCCAGCACCTGAAGGTCTTCCAGCCTGCCACT
TACAGATGTTTTGTGGAGCAGGAGCTCATAGCCCAGTTCAACCCCACTGAGAGACAATCCAAAGCCCAGA
ACCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCCGTTCTTAGGAGATTGAAGTTGATGGTGCT
GAGTATCTCTGTACTGGCCGTTGGAGGGCTTCTCTGTAAGGTGGTTTTCCGTCCTGTCTGCGGCAAGAAG
AGGAGTCAGGTCCTCCTGGTGAAATAA

Translation (358 aa):
MLATLWLVGLSLPMLWAQRLISCPYKNVCQYALLSGSDVILQCNYPKALWYFSSSLEDKLSLVNSKPDGR
VLPGSDLQLSDPKPSQTGLYRCLDNHKARLVEYEIDFQNIALLHITHKDLGQEPMGNESMNLGGKVLVFT
RWDPWQDCNRCQKPGERKRLGYCYVEEPQEKPMPCWLYLREEKVTNSRLRPELQLQACQVPCDTATETNQ
PYFVFDTYLLDKPNSNARLKCPLASIYRPVHWEADNSPLTWQDQLSGQTVSTIMDLHSGGQHLKVFQPAT
YRCFVEQELIAQFNPTERQSKAQNPWQPRIQPDKADSVLRRLKLMVLSISVLAVGGLLCKVVFRPVCGKK
RSQVLLVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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