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Report for CCDS42394.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42394.1 Public Homo sapiens 17 ENGASE 24 110 108 CCDS HistoryNCBI Gene:64772Re-query CCDS DB by CCDS ID:42394.1Re-query CCDS DB by GeneID:64772See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42394.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000579016.6 ENSP00000462333.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000579016.6Link to Ensembl Protein Viewer:ENSP00000462333.1Re-query CCDS DB by Nucleotide ID:ENST00000579016Re-query CCDS DB by Protein ID:ENSP00000462333
Original member Current member NCBI NM_001042573.3 NP_001036038.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001042573.3Link to Protein Sequence:NP_001036038.1Re-query CCDS DB by Nucleotide ID:NM_001042573Re-query CCDS DB by Protein ID:NP_001036038Link to BLAST:NP_001036038.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036038.1 743 Q8NFI3-1 743 100% 0 0

Chromosomal Locations for CCDS 42394.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 79074945 79075090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79077430 79077497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79077663 79077864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79079489 79079637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79080207 79080364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79080925 79081073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79081898 79082063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79083020 79083123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79083482 79083590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79083761 79083951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79084538 79084686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79085234 79085342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79085620 79085734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 79085933 79086349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2232 nt):
ATGGAGGCCGCGGCGGTGACGGTCACCCGGTCGGCTACACGGCGGCGGCGGCGGCAGCTGCAGGGGCTGG
CGGCCCCGGAGGCGGGGACGCAGGAGGAGCAGGAGGATCAGGAGCCGCGGCCGCGGCGGCGGCGGCCGGG
AAGGAGCATCAAAGATGAAGAAGAAGAGACAGTCTTTCGAGAGGTGGTCAGTTTTTCCCCGGACCCCCTG
CCAGTTAGATATTATGACAAGGACACCACCAAACCAATCAGCTTTTACTTGTCTTCGCTGGAGGAGCTCT
TGGCGTGGAAGCCCCGCTTGGAGGATGGCTTTAATGTGGCCCTGGAGCCCCTGGCGTGTCGCCAGCCCCC
TCTGAGCAGCCAGAGGCCCCGGACTTTGTTGTGTCATGACATGATGGGCGGGTACCTGGATGACAGGTTC
ATTCAGGGCTCGGTGGTGCAGACTCCCTATGCTTTCTACCACTGGCAGTGCATCGACGTCTTTGTGTACT
TCAGCCACCACACCGTCACCATTCCCCCAGTGGGCTGGACCAACACTGCCCACAGGCATGGGGTCTGCGT
GCTGGGGACTTTCATCACGGAGTGGAATGAAGGGGGAAGGCTCTGTGAAGCCTTCCTGGCCGGGGATGAG
CGCTCGTACCAGGCAGTGGCTGACCGGCTGGTCCAGATCACTCAGTTTTTTCGTTTTGATGGCTGGCTGA
TCAACATCGAGAACTCGCTGAGTCTGGCCGCTGTGGGGAACATGCCTCCTTTCCTGCGGTACCTCACCAC
ACAGCTGCACCGGCAGGTCCCAGGGGGCCTGGTGCTCTGGTATGACAGCGTGGTGCAAAGTGGGCAGCTC
AAATGGCAAGACGAACTCAACCAGCACAACAGGGTCTTCTTTGATTCCTGCGACGGCTTCTTCACTAACT
ATAACTGGCGGGAGGAGCACTTGGAGCGGATGCTGGGGCAGGCTGGGGAGCGCCGGGCTGATGTGTACGT
GGGCGTGGATGTGTTTGCTCGAGGGAACGTGGTCGGAGGCCGATTCGACACAGACAAGTCGTTGGAGCTG
ATCCGAAAGCATGGCTTCTCCGTGGCTTTGTTTGCCCCCGGCTGGGTGTATGAGTGTCTGGAGAAGAAGG
ATTTCTTCCAGAACCAGGACAAGTTCTGGGGCCGACTGGAGCGTTATCTGCCCACACATAGCATCTGCTC
CTTGCCTTTCGTCACGTCCTTCTGCCTGGGCATGGGTGCACGGAGGGTCTGCTATGGCCAGGAAGAGGCG
GTAGGGCCCTGGTACCACCTGAGCGCCCAGGAGATCCAGCCCTTGTTTGGAGAACACAGGCTGGGAGGGG
ATGGCCGGGGCTGGGTGAGGACGCACTGCTGCCTGGAGGATGCCTGGCACGGAGGCAGCTCCCTGCTCGT
CCGGGGTGTGATCCCACCGGAGGTTGGAAATGTGGCTGTGAGGTTATTTTCCCTGCAGGCCCCAGTGCCA
CCCAAGATTTACCTGTCCATGGTGTATAAGCTTGAGGGGCCCACGGACGTCACAGTTGCTTTGGAGCTGA
CCACAGGGGATGCCGGCAGCTGCCACATCGGTGGCATCTCAGTGTTGAACGCAGAAACAAGCTCAAGACA
CAGCCTCCGACCCCTCCGGGTGCCCCCCACCAAGCTGGCCAGATGGGTGGGCCGCTGCGGCCGGCAGCTG
AGTGGGGGCTGGGTCCAGCACTGCTACGAGGTGAGCCTGCGTGGGTGCCTGCTGCTAGACCTCCTCGTTT
GCTTCTCACGGCCGCCGGGTAGTCGGGAGGAGGAGAGCTTCACCTGTCGGCTTGGAGAGATCCAGGTGGT
GGACGCTGCCAGCCTGCTGGCCCCTCTGCCCCAGGTGCAGGCCGTCACCATCTCTCACATCCGCTGGCAG
CCATCCGCCTCTGAGCGGGAGGGGCCCCCTGCTCTGCTCCAGCTCAGCTGCACCCTGCACTGGTCCTTCC
TCCTCTCACAAGTCCGTTGCTTCCGAATCCACTGCTGGGGAGGGATGAGTGATGACTCTCCGGGCAGGGA
GCTGCCGAGGCCAGAGATGCCCATGTTCCTGGGGTTGGCTTTTGCCACCCAGTACCGGATAGTGGACCTG
CTGGTGGAAGCCGCCGGGCCCGGCCAGGATCGTCGCATGGAATTTCTGGTGGAGCCTGTCCCCAAGGAAG
GGTTCCGGGTACCTCAGGCCGAGTGGGGCAGGGCAGTTCTGCTTTATTCAGCCCCTGCATGA

Translation (743 aa):
MEAAAVTVTRSATRRRRRQLQGLAAPEAGTQEEQEDQEPRPRRRRPGRSIKDEEEETVFREVVSFSPDPL
PVRYYDKDTTKPISFYLSSLEELLAWKPRLEDGFNVALEPLACRQPPLSSQRPRTLLCHDMMGGYLDDRF
IQGSVVQTPYAFYHWQCIDVFVYFSHHTVTIPPVGWTNTAHRHGVCVLGTFITEWNEGGRLCEAFLAGDE
RSYQAVADRLVQITQFFRFDGWLINIENSLSLAAVGNMPPFLRYLTTQLHRQVPGGLVLWYDSVVQSGQL
KWQDELNQHNRVFFDSCDGFFTNYNWREEHLERMLGQAGERRADVYVGVDVFARGNVVGGRFDTDKSLEL
IRKHGFSVALFAPGWVYECLEKKDFFQNQDKFWGRLERYLPTHSICSLPFVTSFCLGMGARRVCYGQEEA
VGPWYHLSAQEIQPLFGEHRLGGDGRGWVRTHCCLEDAWHGGSSLLVRGVIPPEVGNVAVRLFSLQAPVP
PKIYLSMVYKLEGPTDVTVALELTTGDAGSCHIGGISVLNAETSSRHSLRPLRVPPTKLARWVGRCGRQL
SGGWVQHCYEVSLRGCLLLDLLVCFSRPPGSREEESFTCRLGEIQVVDAASLLAPLPQVQAVTISHIRWQ
PSASEREGPPALLQLSCTLHWSFLLSQVRCFRIHCWGGMSDDSPGRELPRPEMPMFLGLAFATQYRIVDL
LVEAAGPGQDRRMEFLVEPVPKEGFRVPQAEWGRAVLLYSAPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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