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Report for CCDS88592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88592.1 Public Mus musculus 14 Dusp13b 23 108 98 CCDS HistoryNCBI Gene:27389Re-query CCDS DB by CCDS ID:88592.1Re-query CCDS DB by GeneID:27389See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88592.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120984.8 ENSMUSP00000113985.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120984.8Link to Ensembl Protein Viewer:ENSMUSP00000113985.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120984Re-query CCDS DB by Protein ID:ENSMUSP00000113985
Original member Current member EBI ENSMUST00000184703.7 ENSMUSP00000138972.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000184703.7Link to Ensembl Protein Viewer:ENSMUSP00000138972.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000184703Re-query CCDS DB by Protein ID:ENSMUSP00000138972
Current member NCBI NM_001374077.1 NP_001361006.1 Accepted alive Link to Nucleotide Sequence:NM_001374077.1Link to Protein Sequence:NP_001361006.1Re-query CCDS DB by Nucleotide ID:NM_001374077Re-query CCDS DB by Protein ID:NP_001361006Link to BLAST:NP_001361006.1
Current member NCBI NM_001374078.1 NP_001361007.1 Accepted alive Link to Nucleotide Sequence:NM_001374078.1Link to Protein Sequence:NP_001361007.1Re-query CCDS DB by Nucleotide ID:NM_001374078Re-query CCDS DB by Protein ID:NP_001361007Link to BLAST:NP_001361007.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001361006.1 198 Q9QYJ7 198 100% 0 0
NP_001361007.1 198 Q9QYJ7 198 100% 0 0

Chromosomal Locations for CCDS 88592.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21733649 21733851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21734896 21735116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21740104 21740276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGGACTCGCTACAGAAGCAGGAACTTCGGAGGCCAAAGATTCATGGGGCAGTCCAGGTGTCCCCCTACC
AGCCACCCACACTGGCCTCTCTGCAGCGATTGCTGTGGGTCCGTCGGACTGCCACACTGACCCACATCAA
TGAGGTCTGGCCCAACCTTTTCTTGGGAGATGCGTATGCTGCCAGAGACAAGGGTCGTCTAATCCAGCTG
GGCATTACCCATGTTGTGAATGTGGCTGCGGGCAAGTTCCAGGTGGACACAGGTGCCAAGTTCTACCGTG
GAACACCTCTGGAGTACTATGGCATTGAGGCTGATGACAACCCCTTCTTTGACCTCAGCGTCCACTTTCT
GCCTGTTGCTCGTTACATCAGAGATGCCCTCAATATTCCCCGAAGCCGAGTGCTGGTCCACTGCGCTATG
GGGGTGAGTCGCTCTGCCACAATTGTCTTGGCCTTCCTCATGATCTTCGAGAACATGACACTGGTAGATG
CCATCCAGACGGTGCAGGCCCACCGAGATATCTGTCCCAACTCAGGCTTCCTCCGACAGCTCCAGGTTCT
GGACAACAGGCTGAGGCGGGAAACAGGAAGACTCTGA

Translation (198 aa):
MDSLQKQELRRPKIHGAVQVSPYQPPTLASLQRLLWVRRTATLTHINEVWPNLFLGDAYAARDKGRLIQL
GITHVVNVAAGKFQVDTGAKFYRGTPLEYYGIEADDNPFFDLSVHFLPVARYIRDALNIPRSRVLVHCAM
GVSRSATIVLAFLMIFENMTLVDAIQTVQAHRDICPNSGFLRQLQVLDNRLRRETGRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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