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Report for CCDS24265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24265.1 Public Mus musculus 10 Mip 23 108 98 CCDS HistoryNCBI Gene:17339Re-query CCDS DB by CCDS ID:24265.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24265.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026455.7 ENSMUSP00000026455.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026455.7Link to Ensembl Protein Viewer:ENSMUSP00000026455.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026455Re-query CCDS DB by Protein ID:ENSMUSP00000026455
Original member Current member NCBI NM_008600.5 NP_032626.2 Accepted alive Link to Nucleotide Sequence:NM_008600.5Link to Protein Sequence:NP_032626.2Re-query CCDS DB by Nucleotide ID:NM_008600Re-query CCDS DB by Protein ID:NP_032626Link to BLAST:NP_032626.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032626.2 263 P51180 263 100% 0 0

Chromosomal Locations for CCDS 24265.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128225882 128226241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128227048 128227212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128227633 128227713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128230319 128230504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGTGGGAACTTCGGTCTGCCTCCTTTTGGAGGGCCATATTTGCTGAGTTCTTTGCCACCCTCTTCTATG
TCTTCTTTGGGCTTGGAGCCTCGCTACGTTGGGCCCCTGGGCCCCTACATGTCTTGCAAGTGGCTTTGGC
CTTTGGCCTGGCCTTGGCTACATTGGTGCAGACTGTGGGTCACATCAGTGGAGCCCATGTCAACCCTGCG
GTCACTTTTGCCTTCCTTGTGGGCTCCCAGATGTCCTTGCTCCGGGCTTTCTGCTATATAGCAGCCCAGC
TTCTGGGAGCTGTGGCTGGGGCGGCTGTGCTGTACAGTGTCACCCCACCAGCTGTCCGAGGAAACCTAGC
GCTCAACACGCTGCATGCTGGGGTGAGCGTGGGCCAGGCCACCACTGTGGAGATCTTCTTGACGCTCCAG
TTCGTGCTCTGCATCTTTGCTACATACGACGAGAGGCGGAATGGCCGCATGGGCTCTGTAGCCCTGGCTG
TTGGCTTCTCCCTCACCCTGGGGCACCTCTTTGGGATGTATTACACTGGTGCGGGGATGAACCCAGCCCG
CTCCTTTGCTCCTGCCATCCTCACCCGGAACTTCAGCAACCACTGGGTGTACTGGGTGGGCCCGATCATC
GGAGGGGGCCTGGGCAGCCTACTCTATGACTTTCTCCTCTTCCCCCGGCTCAAGAGTGTTTCTGAGAGAC
TGTCTATCCTGAAGGGAGCCAGACCCAGTGACTCCAATGGACAGCCAGAGGGTACAGGGGAACCTGTCGA
ACTGAAGACTCAGGCCCTGTAA

Translation (263 aa):
MWELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQTVGHISGAHVNPA
VTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQ
FVLCIFATYDERRNGRMGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPII
GGGLGSLLYDFLLFPRLKSVSERLSILKGARPSDSNGQPEGTGEPVELKTQAL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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