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Report for CCDS16716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16716.1 Public Mus musculus 2 Mertk 23 108 98 CCDS HistoryNCBI Gene:17289Re-query CCDS DB by CCDS ID:16716.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014505.4 ENSMUSP00000014505.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014505.4Link to Ensembl Protein Viewer:ENSMUSP00000014505.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000014505Re-query CCDS DB by Protein ID:ENSMUSP00000014505
Original member NCBI NM_008587.2 NP_032613.1 Updated not alive Link to Nucleotide Sequence:NM_008587.2Link to Protein Sequence:NP_032613.1Re-query CCDS DB by Nucleotide ID:NM_008587Re-query CCDS DB by Protein ID:NP_032613
Current member NCBI NM_008587.3 NP_032613.1 Accepted alive Link to Nucleotide Sequence:NM_008587.3Link to Protein Sequence:NP_032613.1Re-query CCDS DB by Nucleotide ID:NM_008587Re-query CCDS DB by Protein ID:NP_032613Link to BLAST:NP_032613.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032613.1 994 Q60805 994 100% 0 0

Chromosomal Locations for CCDS 16716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 128699046 128699103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128729186 128729594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128736563 128736663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128738196 128738369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128750100 128750186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128751907 128752022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128759043 128759226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128762077 128762228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128771347 128771500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128776286 128776439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128777413 128777498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128778915 128779010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128779792 128779872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128782523 128782615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128783892 128784010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128790217 128790326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128792946 128793105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128794442 128794578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 128801154 128801667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2985 nt):
ATGGTTCTGGCCCCACTGCTACTGGGGCTGCTGCTGCTACCCGCGCTCTGGAGTGGAGGCACTGCCGAGA
AGTGGGAAGAGACCGAGCTAGATCAGCTATTTTCAGGGCCTTTACCAGGGAGACTCCCAGTCAACCACAG
GCCATTCTCTGCTCCTCACTCCAGCCGGGACCAGCTGCCACCACCCCAGACTGGAAGATCACATCCAGCA
CACACAGCCGCTCCCCAGGTGACCTCCACAGCATCAAAGCTCCTACCTCCTGTTGCGTTTAATCACACCA
TTGGACACATAGTACTGTCGGAACATAAAAATGTCAAATTTAATTGCTCCATCAATATTCCTAACACATA
CCAAGAAACAGCTGGCATTTCATGGTGGAAAGATGGAAAGGAATTGCTCGGGGCACATCATTCAATCACA
CAGTTTTATCCTGATGAGGAAGGGGTATCAATAATTGCATTGTTCAGCATAGCCAGTGTGCAGCGCTCAG
ACAATGGGTCGTACTTCTGTAAGATGAAGGTGAACAATAGAGAGATTGTATCTGATCCCATATACGTGGA
AGTTCAAGGACTCCCTTACTTTATTAAGCAGCCTGAGAGTGTGAATGTCACCAGAAACACAGCCTTCAAC
CTCACCTGCCAGGCCGTGGGCCCTCCTGAGCCCGTCAATATCTTCTGGGTTCAAAATAGCAGCCGTGTTA
ATGAAAAACCGGAAAGGTCCCCGTCTGTCCTAACCGTACCTGGTCTGACAGAGACAGCAGTCTTCAGCTG
TGAGGCCCACAATGACAAAGGACTGACGGTGTCCAAGGGTGTACATATCAACATCAAAGTAATCCCCTCC
CCGCCCACTGAAGTCCATATCCTCAACAGTACAGCACACAGCATCCTGGTCTCCTGGGTCCCTGGTTTTG
ATGGCTACTCCCCACTTCAGAACTGCAGCATTCAGGTCAAGGAAGCTGACCGGCTGAGTAATGGCTCAGT
CATGGTTTTTAATACCTCTGCTTCGCCACATCTGTATGAGATCCAGCAGCTGCAAGCCCTGGCTAATTAC
AGCATCGCTGTGTCCTGTCGGAATGAGATTGGCTGGTCTGCAGTAAGCCCTTGGATTCTGGCCAGCACAA
CAGAAGGAGCTCCATCTGTAGCACCTTTAAACATCACTGTGTTTCTGAACGAATCTAACAATATCCTGGA
TATTAGATGGACGAAGCCTCCAATTAAGCGGCAGGATGGGGAACTGGTGGGCTACCGGATATCTCACGTG
TGGGAAAGCGCAGGGACTTACAAAGAGCTTTCTGAAGAAGTCAGCCAGAATGGCAGCTGGGCTCAGATTC
CTGTCCAAATCCACAATGCCACCTGCACAGTGAGAATCGCGGCCATTACTAAAGGGGGCATCGGGCCCTT
CAGTGAGCCAGTGAATATCATCATTCCTGAACACAGTAAGGTAGATTACGCACCCTCGTCAACCCCAGCC
CCTGGCAACACCGACTCTATGTTCATCATCCTCGGCTGCTTCTGTGGATTCATTTTAATCGGGTTAATTT
TGTGTATTTCTCTGGCCCTCAGAAGGAGAGTCCAGGAAACAAAGTTTGGGGGAGCATTCTCTGAGGAGGA
TTCCCAACTGGTCGTAAATTATAGAGCGAAGAAGTCCTTCTGCCGGCGAGCCATCGAGCTTACCTTGCAG
AGCCTGGGAGTGAGCGAGGAGCTGCAGAATAAGCTGGAAGATGTTGTGATTGACAGAAACCTTCTGGTTC
TCGGCAAAGTTCTGGGTGAAGGAGAGTTTGGGTCTGTAATGGAAGGAAATTTGAAGCAAGAAGATGGGAC
TTCTCAGAAGGTGGCAGTGAAGACCATGAAGTTGGACAACTTTTCTCAACGGGAGATCGAGGAGTTTCTC
AGCGAAGCAGCATGCATGAAAGACTTCAACCACCCAAATGTCATCCGACTTCTAGGCGTGTGTATAGAAC
TGAGCTCTCAAGGCATCCCGAAGCCCATGGTGATTTTACCCTTCATGAAATACGGAGACCTCCACACCTT
CCTGTTATATTCCCGATTAAACACAGGACCCAAGTACATTCACCTGCAGACACTACTGAAGTTCATGATG
GACATTGCCCAGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATAGGGATTTGGCAGCTCGAAACT
GCATGTTGCGGGATGACATGACTGTCTGCGTGGCAGACTTTGGCCTCTCAAAGAAGATTTACAGTGGTGA
TTATTACCGCCAAGGCCGCATTGCCAAAATGCCTGTGAAGTGGATCGCCATCGAGAGCCTGGCGGACCGA
GTCTACACAAGCAAAAGTGACGTGTGGGCTTTTGGCGTGACCATGTGGGAAATAACAACACGGGGAATGA
CTCCCTATCCCGGAGTTCAGAACCATGAGATGTACGACTACCTTCTCCACGGCCACAGGCTGAAGCAGCC
TGAGGACTGCTTGGATGAACTGTATGACATCATGTACTCTTGCTGGAGTGCTGATCCCTTGGATCGACCC
ACCTTCTCTGTGTTGAGGCTGCAGCTGGAAAAGCTCTCCGAGAGTTTGCCTGATGCGCAGGACAAAGAAT
CCATCATCTACATCAATACCCAGTTGCTAGAGAGCTGCGAGGGCATAGCCAATGGGCCCTCACTCACGGG
GCTAGACATGAACATTGACCCTGACTCCATCATTGCCTCTTGCACACCAGGCGCTGCCGTCAGCGTGGTC
ACGGCAGAAGTTCACGAGAACAACCTTCGTGAGGAAAGATACATCTTGAATGGGGGCAATGAGGAATGGG
AAGATGTGTCCTCCACTCCTTTTGCTGCAGTCACACCTGAAAAGGATGGTGTCTTACCGGAGGACAGACT
CACCAAAAATGGCGTCTCCTGGTCTCACCATAGTACACTACCCTTGGGGAGCCCATCACCAGATGAACTT
TTATTTGTAGATGACTCCTTGGAAGACTCTGAAGTTCTGATGTGA

Translation (994 aa):
MVLAPLLLGLLLLPALWSGGTAEKWEETELDQLFSGPLPGRLPVNHRPFSAPHSSRDQLPPPQTGRSHPA
HTAAPQVTSTASKLLPPVAFNHTIGHIVLSEHKNVKFNCSINIPNTYQETAGISWWKDGKELLGAHHSIT
QFYPDEEGVSIIALFSIASVQRSDNGSYFCKMKVNNREIVSDPIYVEVQGLPYFIKQPESVNVTRNTAFN
LTCQAVGPPEPVNIFWVQNSSRVNEKPERSPSVLTVPGLTETAVFSCEAHNDKGLTVSKGVHINIKVIPS
PPTEVHILNSTAHSILVSWVPGFDGYSPLQNCSIQVKEADRLSNGSVMVFNTSASPHLYEIQQLQALANY
SIAVSCRNEIGWSAVSPWILASTTEGAPSVAPLNITVFLNESNNILDIRWTKPPIKRQDGELVGYRISHV
WESAGTYKELSEEVSQNGSWAQIPVQIHNATCTVRIAAITKGGIGPFSEPVNIIIPEHSKVDYAPSSTPA
PGNTDSMFIILGCFCGFILIGLILCISLALRRRVQETKFGGAFSEEDSQLVVNYRAKKSFCRRAIELTLQ
SLGVSEELQNKLEDVVIDRNLLVLGKVLGEGEFGSVMEGNLKQEDGTSQKVAVKTMKLDNFSQREIEEFL
SEAACMKDFNHPNVIRLLGVCIELSSQGIPKPMVILPFMKYGDLHTFLLYSRLNTGPKYIHLQTLLKFMM
DIAQGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR
VYTSKSDVWAFGVTMWEITTRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYDIMYSCWSADPLDRP
TFSVLRLQLEKLSESLPDAQDKESIIYINTQLLESCEGIANGPSLTGLDMNIDPDSIIASCTPGAAVSVV
TAEVHENNLREERYILNGGNEEWEDVSSTPFAAVTPEKDGVLPEDRLTKNGVSWSHHSTLPLGSPSPDEL
LFVDDSLEDSEVLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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