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Report for CCDS39766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39766.1 Public Mus musculus 7 Vmn1r67 23 108 98 CCDS HistoryNCBI Gene:171263Re-query CCDS DB by CCDS ID:39766.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39766.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055964.7 ENSMUSP00000060746.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055964.7Link to Ensembl Protein Viewer:ENSMUSP00000060746.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000055964Re-query CCDS DB by Protein ID:ENSMUSP00000060746
Original member Current member NCBI NM_134229.2 NP_598990.2 Accepted alive Link to Nucleotide Sequence:NM_134229.2Link to Protein Sequence:NP_598990.2Re-query CCDS DB by Nucleotide ID:NM_134229Re-query CCDS DB by Protein ID:NP_598990Link to BLAST:NP_598990.2

Chromosomal Locations for CCDS 39766.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 10446811 10447728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGGCTTCAGAAATCTGGCCATCAAAATACTTTTCTTATCACAAATTACAAGTGGAATTCTGGGAAATT
TCTCTCTTCTTATCTATTATCTAGTCTACTATATACAACATGCATTAAAGCCCACAGATTTGATTCTCAT
GCACCTAATGGCATCCAATGCCTTGATAGTTCTCTTTACAGGAATGCCTCACACATTGGCAGCTTTTGAG
ATAAAGCAGTTTTTAAATGATCTTGGATGCAGATTAATTTTGTACATTCAAAGTGTTGGCCGGAGTGTGT
CCGTTAGTACAACCTGTCTCTTGAGTGTCTTTCAAGCCATCACCATCAGTCACAGGAAATCCTGCTTTAA
GGATCAAAAGGTGAATGCTGCAAAGTACATTGGGTGCTGCATTTTCTCTCTCTGGGTCTTGTTTGTAATT
ATACATTTCATTTTCTTTGCATACATACTTGTCAAAAGGAATAGCAAAAATATGACAAGAAACCGAAATT
TTGAGTACTGTTCAATTAGAGGGGGTGATGACATCAATGCCTCACTCTATACAGCATTAGTAGTGTGCCC
TGAAATCTTCTTTTCTGTGCTCATTGCCTGGTCCAGTGTCTCCATGATTGTCATTCTGTACAGACACAAG
CAGACGTTTCAGCACATCCACAGCAATACTATTTACAGCAGAATCTCACCGGAATCCAGAGCCACTCAGA
AGATCCTAGTCCTGGTGTGTACCTTCCTGGCATTTTATACCATCTCCTCTGTTTTACAAGGCTGCATTGC
TCTTTTGCATAATCACAATTGGTGGCTGGTGAACATCACTCGCCTCACTTCTCTGTGTTTTCCATCCTTT
GGACCCTTCGTTCTTATGAATCATTGTACTTTTGTGCCCAGACTCAGTTTGATCTGGATGTGGAATAAAA
TTACCTAA

Translation (305 aa):
MGFRNLAIKILFLSQITSGILGNFSLLIYYLVYYIQHALKPTDLILMHLMASNALIVLFTGMPHTLAAFE
IKQFLNDLGCRLILYIQSVGRSVSVSTTCLLSVFQAITISHRKSCFKDQKVNAAKYIGCCIFSLWVLFVI
IHFIFFAYILVKRNSKNMTRNRNFEYCSIRGGDDINASLYTALVVCPEIFFSVLIAWSSVSMIVILYRHK
QTFQHIHSNTIYSRISPESRATQKILVLVCTFLAFYTISSVLQGCIALLHNHNWWLVNITRLTSLCFPSF
GPFVLMNHCTFVPRLSLIWMWNKIT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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