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Report for CCDS45023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45023.1 Public Homo sapiens 13 ZAR1L 24 110 108 CCDS HistoryNCBI Gene:646799Re-query CCDS DB by CCDS ID:45023.1Re-query CCDS DB by GeneID:646799See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345108.6 ENSP00000344616.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000345108.6Link to Ensembl Protein Viewer:ENSP00000344616.5Re-query CCDS DB by Nucleotide ID:ENST00000345108Re-query CCDS DB by Protein ID:ENSP00000344616
Original member Current member EBI ENST00000533490.7 ENSP00000437289.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533490.7Link to Ensembl Protein Viewer:ENSP00000437289.2Re-query CCDS DB by Nucleotide ID:ENST00000533490Re-query CCDS DB by Protein ID:ENSP00000437289
Original member Current member NCBI NM_001136571.2 NP_001130043.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136571.2Link to Protein Sequence:NP_001130043.1Re-query CCDS DB by Nucleotide ID:NM_001136571Re-query CCDS DB by Protein ID:NP_001130043Link to BLAST:NP_001130043.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001130043.1 321 A6NP61 321 100% 0 0

Chromosomal Locations for CCDS 45023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 32303879 32304022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32308686 32308760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32310639 32310731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32311272 32311925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGAGCGCTTTGTCCGTGTTCCCTATGGCTTGTACCAGGGTTATGGGAGCACAGTGCCTTTGGGCCAGC
CTGGACTCTCAGGGCACAAACAGCCCGACTGGAGGCAAAATATGGGTCCTCCCACTTTTCTGGCCAGGCC
AGGGCTGCTGGTGCCCGCGAACGCCCCTGACTACTGCATTGACCCTTACAAGAGGGCGCAGCTTAAGGCC
ATTCTCTCCCAGATGAACCCCAGCCTGAGCCCGCGGCTGTGCAAGCCCAACACCAAGGAGGTGGGCGTGC
AGGTGAGCCCGCGGGTGGACAAGGCTGTGCAGTGCTCTCTGGGGCCTCGCACCCTCAGCAGCTGCTCCCC
CTGGGACGGCAGAGACCCCCAGGAGCCCCTGCCAGCCTGTGGGGTCACTTCGCCCGCCACCGGCCGCAGG
GGCTTGATCCGCCTGCGGAGAGATGGGGACGAAGCGGAGAGCAAGGCGCTCCCGGGCCCTGCGGAGGCCA
GCCAGCCGCAGCCACCATCACGGAGGTCAGGAGCTGACAGGCAGGAGGAGCCCGGGCAGCTGGAGGAATC
GGGGGAGAAAGACGCCCCGTGCCCTCAGGAGACGAAGAGCAAGCAGGTGCCTGGAGACGCCGCCTCCGAG
CCGCTCCGGAGGCCCAACTTCCAGTTTTTGGAACCAAAATATGGCTATTTCCACTGTAAAGATTGTAAGA
CCAGGTGGGAGAGTGCTTACGTGTGGTGCATTTCTGGAACGAACAAGGTTTATTTCAAACAACTCTGTTG
TAAATGCCAAAAGAGTTTTAACCCTTATCGAGTAGAAGCAATCCAATGTCAGACCTGCTCAAAGTCTCAT
TGTTCCTGTCCTCAAAAGAAGAGACACATTGATCTAAGGAGGCCTCATCGACAGGAACTGTGTGGTCGCT
GCAAAGACAAGAGATTCTCCTGTGGCAATATTTACAGCTTTAAATATGTGATGTGA

Translation (321 aa):
MERFVRVPYGLYQGYGSTVPLGQPGLSGHKQPDWRQNMGPPTFLARPGLLVPANAPDYCIDPYKRAQLKA
ILSQMNPSLSPRLCKPNTKEVGVQVSPRVDKAVQCSLGPRTLSSCSPWDGRDPQEPLPACGVTSPATGRR
GLIRLRRDGDEAESKALPGPAEASQPQPPSRRSGADRQEEPGQLEESGEKDAPCPQETKSKQVPGDAASE
PLRRPNFQFLEPKYGYFHCKDCKTRWESAYVWCISGTNKVYFKQLCCKCQKSFNPYRVEAIQCQTCSKSH
CSCPQKKRHIDLRRPHRQELCGRCKDKRFSCGNIYSFKYVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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