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Report for CCDS38632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38632.1 Public Mus musculus 3 Elovl6 23 108 98 CCDS HistoryNCBI Gene:170439Re-query CCDS DB by CCDS ID:38632.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 38632.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071402.6 ENSMUSP00000071351.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071402.6Link to Ensembl Protein Viewer:ENSMUSP00000071351.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000071402Re-query CCDS DB by Protein ID:ENSMUSP00000071351
Original member Current member EBI ENSMUST00000199910.4 ENSMUSP00000142832.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000199910.4Link to Ensembl Protein Viewer:ENSMUSP00000142832.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000199910Re-query CCDS DB by Protein ID:ENSMUSP00000142832
Original member Current member NCBI NM_130450.2 NP_569717.1 Accepted alive Link to Nucleotide Sequence:NM_130450.2Link to Protein Sequence:NP_569717.1Re-query CCDS DB by Nucleotide ID:NM_130450Re-query CCDS DB by Protein ID:NP_569717Link to BLAST:NP_569717.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_569717.1 267 Q920L5 267 100% 0 0

Chromosomal Locations for CCDS 38632.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 129532680 129532768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129605041 129605172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129628283 129628434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129633060 129633490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGAACATGTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCATCC
AATGGATGCAGGAAAACTGGAAGAAGTCTTTCCTGTTTTCTGCGCTGTACGCTGCCTTTATCTTTGGTGG
TCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCTCTGGTCGCTGACTCTT
GCCGTCTTCAGTATATTCGGTGCTCTTCGAACTGGTGCTTACATGCTGTACATTCTGATGACCAAAGGCC
TGAAGCAGTCAGTTTGTGACCAGAGTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTTATGCATTTGT
GCTCAGCAAAGCACCCGAACTAGGTGACACGATATTCATCATTCTGAGGAAACAGAAACTGATCTTCCTG
CACTGGTACCACCACATCACTGTGCTCCTGTACTCCTGGTACTCCTACAAAGACATGGTCGCTGGGGGTG
GTTGGTTCATGACTATGAACTATGGCGTGCATGCCGTCATGTACTCTTACTACGCCTTGCGGGCTGCGGG
TTTCCGAGTCTCCCGGAAGTTTGCCATGTTCATCACCTTGTCCCAGATCACTCAGATGCTGATGGGCTGT
GTCATTAACTACCTGGTCTTCAACTGGATGCAGCATGACAACGACCAGTGCTACTCCCACTTTCAGAACA
TCTTCTGGTCCTCGCTCATGTACCTCAGCTACCTTGTGCTCTTCTGCCATTTCTTCTTTGAGGCCTACAT
CGGCAAAGTGAAGAAAGCCACGAAGGCTGAGTAG

Translation (267 aa):
MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTL
AVFSIFGALRTGAYMLYILMTKGLKQSVCDQSFYNGPVSKFWAYAFVLSKAPELGDTIFIILRKQKLIFL
HWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSYYALRAAGFRVSRKFAMFITLSQITQMLMGC
VINYLVFNWMQHDNDQCYSHFQNIFWSSLMYLSYLVLFCHFFFEAYIGKVKKATKAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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