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Report for CCDS91902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91902.1 Public Homo sapiens 14 PTGR2 24 110 108 CCDS HistoryNCBI Gene:145482Re-query CCDS DB by CCDS ID:91902.1Re-query CCDS DB by GeneID:145482See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000553813.1 ENSP00000450824.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553813.1Link to Ensembl Protein Viewer:ENSP00000450824.1Re-query CCDS DB by Nucleotide ID:ENST00000553813Re-query CCDS DB by Protein ID:ENSP00000450824
Original member Current member NCBI NM_001371330.1 NP_001358259.1 Accepted alive Link to Nucleotide Sequence:NM_001371330.1Link to Protein Sequence:NP_001358259.1Re-query CCDS DB by Nucleotide ID:NM_001371330Re-query CCDS DB by Protein ID:NP_001358259Link to BLAST:NP_001358259.1
Original member Current member NCBI NM_001371331.1 NP_001358260.1 Accepted alive Link to Nucleotide Sequence:NM_001371331.1Link to Protein Sequence:NP_001358260.1Re-query CCDS DB by Nucleotide ID:NM_001371331Re-query CCDS DB by Protein ID:NP_001358260Link to BLAST:NP_001358260.1
Original member Current member NCBI NM_001371332.1 NP_001358261.1 Accepted alive Link to Nucleotide Sequence:NM_001371332.1Link to Protein Sequence:NP_001358261.1Re-query CCDS DB by Nucleotide ID:NM_001371332Re-query CCDS DB by Protein ID:NP_001358261Link to BLAST:NP_001358261.1

Chromosomal Locations for CCDS 91902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73877052 73877168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73879096 73879305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73880055 73880176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73881205 73881292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73882399 73882438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73884101 73884177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGCCTGGTTTGACTTCCTTGATTGGGATACAGGAAAAAGGTCATATAACTGCTGGATCTAATAAGACAA
TGGTTGTCAGTGGGGCCGCAGGTGCCTGTGGATCTGTGGCTGGGCAGATTGGCCATTTCTTAGGTTGTTC
CAGAGTGGTGGGAATTTGTGGAACACATGAGAAATGCATCCTCTTGACCTCAGAACTGGGCTTTGATGCT
GCAATTAATTATAAAAAAGACAATGTGGCAGAACAGCTCCGTGAATCATGCCCAGCTGGAGTGGATGTTT
ATTTTGACAATGTTGGTGGTAACATCAGTGATACAGTGATAAGTCAGATGAATGAGAACAGCCACATCAT
CCTGTGTGGTCAAATTTCTCAGTACAACAAAGATGTGCCTTATCCTCCCCCGCTATCCCCTGCTATAGAG
GCAATCCAGAAAGAAAGAAACATCACAAGGGAAAGATTTCTGGTATTAAATTATAAAGACAAATTTGAGC
CTGGCATTCTACAGCTGAGTCAGTGGTTTAAAGAAGGAAAGCTAAAGATTAAAGAGACGGTAATAAATGG
GTTGGAAAACATGGGAGCTGCATTCCAGTCCATGATGACAGGAGGTAACATTGGAAAGCAGATAGTTTGC
ATTTCAGAAGAAATCTCTTTGTAA

Translation (217 aa):
MPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA
AINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIE
AIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVC
ISEEISL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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