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Report for CCDS33587.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33587.1 Public Homo sapiens 21 SUMO3 24 110 108 CCDS HistoryNCBI Gene:6612Re-query CCDS DB by CCDS ID:33587.1Re-query CCDS DB by GeneID:6612See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33587.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332859.11 ENSP00000330343.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332859.11Link to Ensembl Protein Viewer:ENSP00000330343.7Re-query CCDS DB by Nucleotide ID:ENST00000332859Re-query CCDS DB by Protein ID:ENSP00000330343
Original member Current member NCBI NM_006936.3 NP_008867.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006936.3Link to Protein Sequence:NP_008867.2Re-query CCDS DB by Nucleotide ID:NM_006936Re-query CCDS DB by Protein ID:NP_008867Link to BLAST:NP_008867.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008867.2 103 P55854-1 103 100% 0 0

Chromosomal Locations for CCDS 33587.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44806951 44807040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44809047 44809118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44813976 44814104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44817948 44817968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGTCCGAGGAGAAGCCCAAGGAGGGTGTGAAGACAGAGAATGACCACATCAACCTGAAGGTGGCCGGGC
AGGACGGCTCCGTGGTGCAGTTCAAGATCAAGAGGCACACGCCGCTGAGCAAGCTGATGAAGGCCTACTG
CGAGAGGCAGGGCTTGTCAATGAGGCAGATCAGATTCAGGTTCGACGGGCAGCCAATCAATGAAACTGAC
ACTCCAGCACAGCTGGAGATGGAGGACGAGGACACCATCGACGTGTTCCAGCAGCAGACGGGAGGTGTGC
CGGAGAGCAGCCTGGCAGGGCACAGTTTCTAG

Translation (103 aa):
MSEEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETD
TPAQLEMEDEDTIDVFQQQTGGVPESSLAGHSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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