NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92698.1 Public Homo sapiens 19 ZNF530 24 110 108 CCDS HistoryNCBI Gene:348327Re-query CCDS DB by CCDS ID:92698.1Re-query CCDS DB by GeneID:348327See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597700.6 ENSP00000472024.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597700.6Link to Ensembl Protein Viewer:ENSP00000472024.2Re-query CCDS DB by Nucleotide ID:ENST00000597700Re-query CCDS DB by Protein ID:ENSP00000472024
Original member Current member NCBI NM_001321981.2 NP_001308910.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321981.2Link to Protein Sequence:NP_001308910.1Re-query CCDS DB by Nucleotide ID:NM_001321981Re-query CCDS DB by Protein ID:NP_001308910Link to BLAST:NP_001308910.1
Original member Current member NCBI NM_001387561.1 NP_001374490.1 Accepted alive Link to Nucleotide Sequence:NM_001387561.1Link to Protein Sequence:NP_001374490.1Re-query CCDS DB by Nucleotide ID:NM_001387561Re-query CCDS DB by Protein ID:NP_001374490Link to BLAST:NP_001374490.1

Chromosomal Locations for CCDS 92698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57604346 57604406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57605686 57607325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1701 nt):
ATGCAGAGGCTCCTGTACCGCGATGTGATGCTGGAGAACTTTGCAGTTATGGCATCCCTAGGTTGCTGGT
GTGGAGCAGTAGATGAGGGGACGCCTTCTGCAGAGAGCGTTTCTGTGGAAGAACTGTCACAGGGCAGGAC
TCCAAAGGCAGATACATCCACTGATAAGAGTCACCCCTGTGAGATTTGTACCCCAGTCCTGAGAGACATT
TTACAAATGATTGAGCTCCATGCCTCACCCTGTGGACAGAAATTGTACTTGGGTGGAGCATCAAGAGATT
TCTGGATGAGTTCAAACCTTCACCAGCTCCAGAAGCTTGATAATGGAGAGAAGCTCTTTAAAGTGGATGG
GGACCAGGCCTCATTTATGATGAACTGCAGGTTCCATGTGTCAGGAAAACCCTTCACGTTTGGGGAAGTC
GGGAGGGACTTTTCAGCCACCTCAGGACTTCTCCAGCATCAGGTGACTCCCACCATTGAGAGACCACACA
GCAGGATTAGACACTTGAGAGTTCCCACTGGACGAAAGCCTCTCAAATACACTGAATCCAGGAAATCTTT
TAGAGAGAAATCTGTATTCATTCAACACCAAAGAGCTGACTCTGGAGAAAGGCCTTACAAGTGCAGTGAA
TGTGGGAAATCCTTTAGTCAAAGTTCTGGCTTTCTTCGACACAGGAAAGCACACGGTAGAACAAGGACTC
ATGAATGTAGTGAATGTGGGAAATCATTTAGTCGCAAAACTCACCTAACTCAACACCAAAGAGTTCACAC
TGGAGAAAGGCCTTATGACTGCAGTGAATGTGGCAAATCCTTTCGCCAGGTATCTGTCCTCATTCAACAT
CAACGAGTTCACACTGGAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAATCTTTTAGCCACAGCACTA
ACCTCTATCGTCACAGGAGTGCCCACACTAGCACAAGGCCTTATGAGTGCAGTGAATGTGGAAAATCCTT
TAGCCATAGCACTAACCTCTTTCGACACTGGAGAGTTCACACTGGAGTAAGGCCTTATGAGTGTAGTGAA
TGTGGGAAAGCATTTAGTTGCAATATCTACCTTATTCACCACCAAAGATTTCACACTGGAGAAAGACCTT
ATGTGTGCAGTGAATGTGGGAAATCATTTGGCCAGAAATCTGTCCTCATTCAACACCAAAGAGTTCACAC
TGGAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAAGTTTTTAGCCAAAGCTCTGGCCTCTTTCGACAC
AGAAGAGCTCACACTAAAACAAAGCCTTATGAGTGCAGTGAATGTGAAAAATCATTTAGTTGCAAAACTG
ACCTCATTCGACACCAGACAGTTCACACTGGAGAAAGGCCTTATGAGTGCAGTGTATGTGGGAAATCTTT
TATCCGAAAAACCCACCTCATTCGACACCAGACTGTTCACACTAATGAAAGGCCTTATGAGTGCGATGAA
TGTGGGAAATCCTATAGCCAAAGCTCTGCCCTCCTTCAGCATAGGAGAGTTCACACTGGAGAAAGGCCTT
ATGAGTGCAGAGAATGTGGGAAATCTTTTACCCGCAAAAATCACCTCATTCAACACAAGACAGTTCACAC
TGGAGAAAGGCCTTATGAATGCAGTGAATGTGGAAAATCCTTTAGCCAAAGCTCTGGCCTCTTAAGACAC
AGAAGAGTTCATGTGCAGTGA

Translation (566 aa):
MQRLLYRDVMLENFAVMASLGCWCGAVDEGTPSAESVSVEELSQGRTPKADTSTDKSHPCEICTPVLRDI
LQMIELHASPCGQKLYLGGASRDFWMSSNLHQLQKLDNGEKLFKVDGDQASFMMNCRFHVSGKPFTFGEV
GRDFSATSGLLQHQVTPTIERPHSRIRHLRVPTGRKPLKYTESRKSFREKSVFIQHQRADSGERPYKCSE
CGKSFSQSSGFLRHRKAHGRTRTHECSECGKSFSRKTHLTQHQRVHTGERPYDCSECGKSFRQVSVLIQH
QRVHTGERPYECSECGKSFSHSTNLYRHRSAHTSTRPYECSECGKSFSHSTNLFRHWRVHTGVRPYECSE
CGKAFSCNIYLIHHQRFHTGERPYVCSECGKSFGQKSVLIQHQRVHTGERPYECSECGKVFSQSSGLFRH
RRAHTKTKPYECSECEKSFSCKTDLIRHQTVHTGERPYECSVCGKSFIRKTHLIRHQTVHTNERPYECDE
CGKSYSQSSALLQHRRVHTGERPYECRECGKSFTRKNHLIQHKTVHTGERPYECSECGKSFSQSSGLLRH
RRVHVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH