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Report for CCDS73904.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73904.1 Public Homo sapiens 16 TSNAXIP1 24 110 108 CCDS HistoryNCBI Gene:55815Re-query CCDS DB by CCDS ID:73904.1Re-query CCDS DB by GeneID:55815See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73904.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000415766.7 ENSP00000411472.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000415766.7Link to Ensembl Protein Viewer:ENSP00000411472.3Re-query CCDS DB by Nucleotide ID:ENST00000415766Re-query CCDS DB by Protein ID:ENSP00000411472
Original member Current member NCBI NM_001288991.3 NP_001275920.1 Accepted alive Link to Nucleotide Sequence:NM_001288991.3Link to Protein Sequence:NP_001275920.1Re-query CCDS DB by Nucleotide ID:NM_001288991Re-query CCDS DB by Protein ID:NP_001275920Link to BLAST:NP_001275920.1

Chromosomal Locations for CCDS 73904.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67807150 67807196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67814302 67814401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67821099 67821225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67824583 67824779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825137 67825272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825667 67825836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67825917 67826076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826152 67826282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826437 67826562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826692 67826844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67826963 67827072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827249 67827375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827473 67827579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67827753 67827993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1932 nt):
ATGGCCTGCCAGCAGTCGCGGTACCACAGCTTCTCGTCCGCGTCGAGATTACAGCCACGGCCTTCAGGAG
TGACCATAGACGAATCCTTTCTCACAGAAGACAAGAGCACCCAGAATCGCAAGCTTCTTCAGAAACGAAG
GACGCTGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGGAACTGGAAAACTA
CCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTGCAGCCCACC
AAAGGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTGTCACTGTGAATGAGGACTGCAATGA
GAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTCAAGAAAGAGAAGATGAACTTG
CTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGTGACCAAACTGAGGAAGA
ACTTGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCATCGCAGACCTGAA
TGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAGGACCCTGTG
AAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAACATGA
AGGCCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTCA
GGAGCAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTG
CACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGC
CGCGGCCTGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGA
GGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAA
GACTTCTTCCCTGGTCTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGA
ACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGA
GCAGAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATG
GCCTGGGCTTATACTATTTTTGAAAATATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATG
CAGTCTTGATGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAA
GGAGATGACAAATGCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAAG
AGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCATCCCAGCA
GCAGCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTT
TGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTT
GGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCC
TGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGA
GGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTCAGGTGATTGAC
ATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGCTAG

Translation (643 aa):
MACQQSRYHSFSSASRLQPRPSGVTIDESFLTEDKSTQNRKLLQKRRTLELPAAPLSHCQAPVLGGTGKL
PTQGAPPAGPGHRFHPGTKAAAHQREKIRALEPLKAKLVTVNEDCNERILAMRAEEKYEISLLKKEKMNL
LKLIDKKNEEKISLQSEVTKLRKNLAEEYLHYLSERDACKILIADLNELRYQREDMSLAQSPGIWGEDPV
KLTLALKMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQEQLDTLRASYEEVRKEHEILMQL
HMSTLKERDQFFSELQEIQRTSTPRPDWTKCKDVVAGGPERWQMLAEGKNSDQLVDVLLEEIGSGLLREK
DFFPGLGYGEAIPAFLRFDGLVENKKPSKKDVVNLLKDAWKERLAEEQKETFPDFFFNFLEHRFGPSDAM
AWAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETVAQLLKEMTNADSQNEGLLTMEQFNTVLK
STFPLKTEEQIQELMEAGGWHPSSSNADLLNYRSLFMEDEEGQSEPFVQKLWEQYMDEKDEYLQQLKQEL
GIELHEEVTLPKLRGGLMTIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVID
IRRVGPREPEPAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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