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Report for CCDS58763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58763.1 Public Homo sapiens 20 ADISSP 24 110 108 CCDS HistoryNCBI Gene:54976Re-query CCDS DB by CCDS ID:58763.1Re-query CCDS DB by GeneID:54976See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58763.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379772.4 ENSP00000369097.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379772.4Link to Ensembl Protein Viewer:ENSP00000369097.4Re-query CCDS DB by Nucleotide ID:ENST00000379772Re-query CCDS DB by Protein ID:ENSP00000369097
Original member Current member EBI ENST00000399672.5 ENSP00000382580.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399672.5Link to Ensembl Protein Viewer:ENSP00000382580.1Re-query CCDS DB by Nucleotide ID:ENST00000399672Re-query CCDS DB by Protein ID:ENSP00000382580
Original member Current member NCBI NM_001258429.2 NP_001245358.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001258429.2Link to Protein Sequence:NP_001245358.1Re-query CCDS DB by Nucleotide ID:NM_001258429Re-query CCDS DB by Protein ID:NP_001245358Link to BLAST:NP_001245358.1
Original member Current member NCBI NM_001258430.2 NP_001245359.1 Accepted alive Link to Nucleotide Sequence:NM_001258430.2Link to Protein Sequence:NP_001245359.1Re-query CCDS DB by Nucleotide ID:NM_001258430Re-query CCDS DB by Protein ID:NP_001245359Link to BLAST:NP_001245359.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245358.1 174 Q9GZN8-1 174 100% 0 0
NP_001245359.1 174 Q9GZN8-1 174 100% 0 0

Chromosomal Locations for CCDS 58763.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 3754058 3754158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3754397 3754519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3755469 3755607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3758536 3758678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3760082 3760100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGCTGCAGCCAACAAGGGCAACAAGCCCAGAGTCCGGAGTATCCGCTTTGCGGCAGGCCACGATGCAG
AAGGATCCCACAGCCACGTCCACTTTGATGAGAAGCTGCATGACTCGGTGGTCATGGTCACCCAGGAGAG
TGACAGCAGCTTTCTGGTCAAGGTTGGCTTCCTGAAGATCCTGCACAGGTATGAGATTACCTTCACTCTG
CCCCCAGTGCACAGGCTGAGCAAGGATGTCCGCGAGGCACCTGTCCCCAGCCTGCACCTCAAGCTCCTCA
GCGTGGTGCCCGTCCCTGAAGGTTATAGTGTCAAGTGTGAGTACTCGGCGCACAAAGAGGGCGTCCTCAA
AGAGGAGATACTGCTAGCCTGCGAAGGTGGCACTGGCACCTGTGTGCGCGTGACGGTGCAGGCCCGCGTC
ATGGACCGGCACCACGGCACGCCCATGCTGCTGGATGGTGTCAAGTGTGTGGGCGCCGAGCTGGAATACG
ACTCAGAGCACAGCGACTGGCACGGCTTTGACTGA

Translation (174 aa):
MAAANKGNKPRVRSIRFAAGHDAEGSHSHVHFDEKLHDSVVMVTQESDSSFLVKVGFLKILHRYEITFTL
PPVHRLSKDVREAPVPSLHLKLLSVVPVPEGYSVKCEYSAHKEGVLKEEILLACEGGTGTCVRVTVQARV
MDRHHGTPMLLDGVKCVGAELEYDSEHSDWHGFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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