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Report for CCDS74718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74718.1 Public Homo sapiens 20 NOL4L 24 110 108 CCDS HistoryNCBI Gene:140688Re-query CCDS DB by CCDS ID:74718.1Re-query CCDS DB by GeneID:140688See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 74718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621426.7 ENSP00000483523.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621426.7Link to Ensembl Protein Viewer:ENSP00000483523.1Re-query CCDS DB by Nucleotide ID:ENST00000621426Re-query CCDS DB by Protein ID:ENSP00000483523
Original member Current member NCBI NM_001256798.2 NP_001243727.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256798.2Link to Protein Sequence:NP_001243727.1Re-query CCDS DB by Nucleotide ID:NM_001256798Re-query CCDS DB by Protein ID:NP_001243727Link to BLAST:NP_001243727.1

Chromosomal Locations for CCDS 74718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 32447596 32447816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32452236 32452437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32452884 32453006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32453304 32453495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32453576 32453761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32456118 32456395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32474601 32474742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32511347 32511456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32520811 32520922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32527758 32527913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 32584570 32584890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2043 nt):
ATGCCGAAGCCGACGCTGCTGCTGCGCGGGGGCTGGGAGCGCGAGCGCAGCCCCGGGGACTCGGAGCTGG
GCCGCCAGTTCCGGGACTGGTGCTTGCGCACCTACGGCGACTCGGCCAAAACCAAGACGGTGACACGCAG
CAAATACCAGCGGATCGCCGAGGTCCTGCAGGGCGGCGGCGGGACTGGCGCGGGCAGCGGCCCCGCAGCC
GGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCA
AGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGCAGATGGCCTGTCGGAGCCAGAGGG
CATCTCTCTGAAGCGGGTCGCTGTGGTGGAAGATTTCTTTGACATCATCTACTCGATGCATGTGGAGAGC
TCAGCGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAAAACCTACCGAGCGATCGCAGAGACCT
ATGCCTTCCTCCCGAGAGAGGCCGTGACCCGGTTCCTGATGAGCTGTACGGAGTGTCAGAAGAGGATGCA
CTTTAACTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATTATTGAT
TACAACATGCCCCTCACCTCCACCTACCTGAAGCAGATGAAGCTTCGAGTGATGAATTCCCAGGAGCAGG
ATGAGACTTCTGTGAGCAGCGAGGATTTTGATATGAGCGACTCCACATGGATGTCAGCTGACCCGCACCT
GGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCGGAGCCCGCAGAACCTCCACAGTCAAGAGGAC
GATGACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCA
CGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCCCATGGACTTCACCACGGC
CGCCGAGGATCAGCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCCTAC
CCCTCGGATGGCTGCGGTGCCGACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGACCACCCCCGAGT
CCCCCCCCTACAGCTCTGGGAGCTACGATTCCATCAAGACCGAGGTCAGCGGCTGCCCTGAGGACCTGAC
AGTGGGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGATGACCATGAGGACAATGACAAGATG
AACGACTCTGAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTTGTGGACG
AGAACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGGCCATCATCGAGTCCTG
CAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTACCTCAAGTCCTGCCGT
CGCATGAAGAAGAACGGCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAA
ACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGAGATCTACCA
GTCCTCACAGGATGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGCAGCCATCACCCACTCC
ACCTACTCACTGCCAGCCTCCTCCTACTCCCAGGACCCTGTGTACGCCAACGGCGGCCTCAACTACAGTT
ACCGCGGGTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTGCCTCCCTCCAAACAGGAAACCACAGTAA
TGGGCCCACGGACCTCAGCATGAAAGGCGGGGCCTCTACCACCTCCACCACCCCCACGCCCACCCCCTCC
AGCACCAGCACCAGCAGGCCCGTGCCCACCGCTCAGCTCAGCCCCACGGAGATCAGCGCCGTGCGGCAGC
TCATCGCGGGCTACCGGGAGTCTGCTGCCTTCCTGCTGCGCTCTGCAGATGAACTGGAAAACCTCATCCT
ACAGCAGAACTGA

Translation (680 aa):
MPKPTLLLRGGWERERSPGDSELGRQFRDWCLRTYGDSAKTKTVTRSKYQRIAEVLQGGGGTGAGSGPAA
GEKGKFQFWVRSKGFRLGSGREPKMGQVVYVPVKTGSGADGLSEPEGISLKRVAVVEDFFDIIYSMHVES
SAEPGKAPKHAGQKKTYRAIAETYAFLPREAVTRFLMSCTECQKRMHFNSNGLEPKENEPPSPLVSGIID
YNMPLTSTYLKQMKLRVMNSQEQDETSVSSEDFDMSDSTWMSADPHLASSLSPSQDERMRSPQNLHSQED
DDSSSESGSGNGSSTLNPSTSSSTQGDPAFPEMNGNGAVAPMDFTTAAEDQPINLCDKLPPATALGTASY
PSDGCGADGLRSRVKYGVKTTPESPPYSSGSYDSIKTEVSGCPEDLTVGRAPTADDDDDDHDDHEDNDKM
NDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFPEFQERARKRIRTYLKSCR
RMKKNGMEMTRPTPPHLTSAMAENILAAACESETRKAAKRMRLEIYQSSQDEPIALDKQHSRDSAAITHS
TYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPTDLSMKGGASTTSTTPTPTPS
STSTSRPVPTAQLSPTEISAVRQLIAGYRESAAFLLRSADELENLILQQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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