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Report for CCDS82315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82315.1 Public Homo sapiens 19 NIBAN3 24 110 108 CCDS HistoryNCBI Gene:199786Re-query CCDS DB by CCDS ID:82315.1Re-query CCDS DB by GeneID:199786See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601861.5 ENSP00000471168.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601861.5Link to Ensembl Protein Viewer:ENSP00000471168.1Re-query CCDS DB by Nucleotide ID:ENST00000601861Re-query CCDS DB by Protein ID:ENSP00000471168
Original member Current member NCBI NM_001321826.2 NP_001308755.2 Accepted alive Link to Nucleotide Sequence:NM_001321826.2Link to Protein Sequence:NP_001308755.2Re-query CCDS DB by Nucleotide ID:NM_001321826Re-query CCDS DB by Protein ID:NP_001308755Link to BLAST:NP_001308755.2

Chromosomal Locations for CCDS 82315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17527341 17527395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17530755 17530885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17532263 17532388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17533587 17533701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17537376 17537543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539150 17539265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539347 17539451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17539603 17539765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17540392 17540582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17542136 17542294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17543317 17543433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17543524 17543631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17546686 17546797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17549444 17549527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17553313 17553563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2001 nt):
ATGGGTGGGCGGCCTTCGAGCCCTCTGGACAAGCAGCAGCGGCAGCACCTAAGGGGTCAGGTGGACACCC
TGCTGAGGAACTTCCTGCCTTGCTACCGTGGGCAGCTGGCAGCGTCTGTCCTGCGGCAGATCTCTCGAGA
GCTGGGCCCTCAGGAGCCGACCGGAAGCCAGTTGCTACGCAGCAAAAAGCTGCCCCGAGTCCGTGAGCAC
CGAGGACCCCTGACCCAGCTTCGGGGCCACCCACCCCGGTGGCAGCCGATCTTCTGTGTTCTGCGTGGGG
ACGGCCGCCTAGAGTGGTTCAGCCACAAGGAGGAATATGAAAACGGGGGCCACTGCCTTGGCTCAACAGC
CCTGACAGGATACACGCTCCTGACTTCCCAGCGAGAATATCTCCGCCTTTTGGATGCTCTCTGCCCTGAA
TCCTTGGGAGACCATACTCAGGAAGAGCCTGACTCCCTCTTGGAAGTGCCTGTGAGCTTCCCGCTGTTCC
TGCAGCACCCCTTCCGCCGGCACCTCTGCTTCTCTGCAGCCACCAGGGAGGCACAGCATGCCTGGAGGCT
GGCCCTGCAGGGTGGCATCCGGCTTCAGGGCATAGTCCTGCAGCGAAGCCAGGCCCCTGCTGCCCGGGCC
TTCCTGGACGCCGTCCGACTCTACCGGCAGCACCAAGGCCACTTTGGCGACGACGACGTGACCCTAGGCT
CAGACGCCGAGGTGCTGACCGCGGTGCTGATGCGGGAGCAACTTCCCGCGCTGCGAGCCCAGACCCTTCC
TGGCCTGCGGGGGGCAGGCCGCGCCCGCGCCTGGGCCTGGACCGAGCTTCTAGACGCCGTTCACGCAGCT
GTCCTGGCCGGGGCCTCCGCCGGGCTCTGCGCCTTCCAGCCCGAAAAGGACGAGCTGCTTGCGTCGCTGG
AGAAGACGATCCGCCCGGACGTGGACCAGCTGCTGCGGCAGCGGGCGCGTGTGGCGGGGCGGCTGAGGAC
GGATATCAGGGGACCGCTCGAGTCGTGCCTGCGCCGGGAGGTGGACCCGCAGCTGCCCCGGGTCGTGCAG
ACCCTGCTGCGCACCGTGGAAGCCTCGCTCGAGGCGGTGCGGACCCTCCTGGCTCAAGGCATGGACCGAC
TGTCCCACCGCCTGCGCCAGAGCCCCTCAGGCACGCGGCTGCGCAGGGAGGTTTACTCATTTGGGGAGAT
GCCGTGGGACTTGGCGCTGATGCAGACATGCTACCGTGAGGCCGAGCGGAGCCGGGGGCGCTTGGGGCAG
CTGGCAGCACCGTTTGGCTTTCTGGGGATGCAGAGCCTCGTGTTTGGGGCCCAAGATCTTGCACAGCAGC
TCATGGCTGACGCCGTGGCCACCTTCCTGCAGCTGGCTGACCAGTGTCTGACGACGGCCCTCAACTGTGA
CCAGGCTGCCCAGAGGCTGGAGAGAGTCAGGGGGCGCGTGCTGAAGAAATTCAAATCGGACAGCGGGTTG
GCGCAGAGGAGGTTCATCCGAGGCTGGGGTCTCTGCATCTTTTTACCTTTTGTGCTGAGCCAACTCGAGC
CAGGCTGCAAAAAGGAGCTGCCTGAGTTCGAGGGGGATGTCCTTGCCGTGGGCAGCCAGGCTCTGACCAC
TGAGGGCATCTATGAGGACGTCATCCGGGGGTGCTTGCTGCAGAGGATTGACCAAGAATTGAAAAAGACC
CTTGGTGCCAATGATGTATCCTGCACTCTGGACGGCTGCTTGGAGGTCCCATGGGAACAGGAGGGAGCAG
CTCCAAATCTTAACTTGGTGTCAAGTTTCCTGGCTGGGAGACAAGCTTTTACCGACTTCCTCTGCTTGCC
AGCAAAGTCATCTGCTAACTGGATATTGGCAGCTTCTCTGCTGTCTTGCAGCTGCTTCCGGAGTGGGTTC
CACAGGGATTCCCGTGTGTTCTTGGTTCAGCTTGCAGAGGGACTTTCACACTCCCTGGAGACCGTTTCCT
CCCATTCTGTCTGGAGTTTTCGGCCTACCCCAAGACAATGA

Translation (666 aa):
MGGRPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREH
RGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPE
SLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGIVLQRSQAPAARA
FLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWAWTELLDAVHAA
VLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDIRGPLESCLRREVDPQLPRVVQ
TLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMPWDLALMQTCYREAERSRGRLGQ
LAAPFGFLGMQSLVFGAQDLAQQLMADAVATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGL
AQRRFIRGWGLCIFLPFVLSQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKT
LGANDVSCTLDGCLEVPWEQEGAAPNLNLVSSFLAGRQAFTDFLCLPAKSSANWILAASLLSCSCFRSGF
HRDSRVFLVQLAEGLSHSLETVSSHSVWSFRPTPRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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