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Report for CCDS59059.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59059.1 Public Homo sapiens 7 POM121 24 110 108 CCDS HistoryNCBI Gene:9883Re-query CCDS DB by CCDS ID:59059.1Re-query CCDS DB by GeneID:9883See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59059.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395270.5 ENSP00000378687.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395270.5Link to Ensembl Protein Viewer:ENSP00000378687.1Re-query CCDS DB by Nucleotide ID:ENST00000395270Re-query CCDS DB by Protein ID:ENSP00000378687
Original member Current member NCBI NM_001257190.3 NP_001244119.1 Accepted alive Link to Nucleotide Sequence:NM_001257190.3Link to Protein Sequence:NP_001244119.1Re-query CCDS DB by Nucleotide ID:NM_001257190Re-query CCDS DB by Protein ID:NP_001244119Link to BLAST:NP_001244119.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244119.1 999 Q96HA1-3 999 100% 0 0

Chromosomal Locations for CCDS 59059.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 72926413 72926477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72926802 72926963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72928385 72928465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72929940 72930111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72938590 72938681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72939336 72939409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72939847 72939968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72940414 72940516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72940817 72940993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72941837 72943522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72945586 72945708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72948328 72948470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3000 nt):
ATGGTGTGTAGCCCAGTGACTGTGAGGATCGCCCCTCCTGACAGAAGATTTTCGCGTTCTGCGATACCAG
AGCAGATAATCAGCTCAACACTGTCCTCACCATCAAGTAACGCCCCAGACCCATGTGCAAAGGAGACAGT
ACTGAGTGCCCTCAAAGAGAAGGAGAAGAAAAGGACAGTGGAGGAAGAAGACCAAATATTCCTTGATGGC
CAGGAAAATAAAAGAAGGCGCCATGATAGCAGTGGCAGTGGACATTCAGCATTTGAGCCCCTGGTGGCCA
ATGGAGTCCCCGCTTCTTTTGTGCCTAAGCCTGGGTCTCTGAAGAGAGGCCTCAATTCTCAGAGCTCAGA
TGACCACTTGAATAAGAGATCCCGAAGCTCTTCCATGAGCTCCTTGACAGGCGCTTACGCAAGTGGCATC
CCTAGCTCCAGCCGCAATGCCATTACCAGTTCCTACAGCTCCACTCGAGGCATCTCACAGCTCTGGAAGA
GAAATGGCCCCAGTTCATCACCCTTCTCTAGCCCAGCCTCCTCCCGCTCCCAGACACCGGAGAGGCCAGC
AAAGAAAATAAGAGAAGAGGAGCTGTGTCATCATTCCAGTTCTTCAACTCCATTGGCAGCAGACAGGGAG
TCCCAGGGAGAAAAGGCTGCAGATACAACCCCAAGGAAGAAACAAAACTCGAATTCTCAGTCTACACCTG
GCAGCTCTGGGCAGCGTAAGCGGAAAGTTCAGCTGCTGCCTTCTCGGCGAGGGGAACAGCTGACCTTGCC
TCCACCTCCCCAGCTTGGCTATTCGATCACTGCCGAGGACCTAGACTTAGAGAAGAAGGCTTCATTACAG
TGGTTCAACCAGGCCTTGGAGGACAAGAGCGATGCTGCCTCGAACTCTGTCACTGAGACCCCACCTATCA
CTCAGCCTTCATTTACCTTTACCCTGCCTGCTGCTGCACCTGCCTCCCCACCCACCTCCCTCCTGGCCCC
AAGCACCAACCCACTGTTAGAGAGCTTGAAGAAGATGCAGACTCCCCCGAGCCTGCCACCCTGCCCAGAA
TCTGCTGGAGCAGCAACCACTGAGGCCCTCTCACCTCCAAAGACACCCAGCCTCCTACCCCCGCTGGGTT
TATCACAGTCAGGGCCGCCAGGGCTGCTCCCCAGCCCCTCCTTTGACTCCAAACCCCCGACCACTTTGCT
GGGGCTGATCCCTGCTCCATCCATGGTACCAGCCACTGACACCAAGGCACCTCCAACCCTTCAGGCAGAG
ACGGCTACCAAACCCCAAGCCACATCTGCCCCGTCCCCCGCCCCCAAGCAAAGCTTCCTGTTTGGAACAC
AGAACACCTCACCTTCCAGCCCTGCCGCCCCTGCTGCATCTTCAGCACCTCCCATGTTCAAGCCCATTTT
CACGGCTCCACCCAAGAGTGAGAAGGAAGGCCCCACACCGCCTGGCCCTTCAGTCACAGCCACAGCGCCC
TCCAGCTCCTCCCTCCCCACGACCACCAGCACCACAGCCCCGACCTTCCAGCCTGTCTTTAGCAGCATGG
GGCCACCTGCATCTGTGCCCTTGCCTGCTCCCTTCTTCAAGCAGACAACTACTCCCGCCACTGCTCCCAC
CACAACTGCCCCGCTCTTCACTGGCCTGGCCAGCGCCACCTCTGCTGTGGCTCCCATCACCTCTGCCAGT
CCATCCACAGACTCTGCTTCGAAGCCTGCGTTTGGCTTTGGCATAAACAGTGTGAGCAGCAGCAGTGTGA
GTACCACGACCAGCACCGCCACTGCCGCCTCACAGCCTTTCCTCTTCGGGGCGCCCCAGGCCTCTGCTGC
CAGCTTCACCCCGGCCATGGGCTCCATATTCCAGTTTGGCAAACCTCCTGCCTTGCCCACAACCACCACA
GTCACCACCTTCAGCCAGTCCCTGCACACTGCCGTGCCAACGGCCACCAGCAGCAGCGCTGCCGACTTTA
GTGGTTTTGGCAGCACCCTCGCCACCTCCGCCCCGGCCACCAGCAGCCAGCCCACTCTGACGTTCAGTAA
CACGAGCACCCCCACGTTCAACATTCCCTTTGGCTCAAGCGCCAAGTCCCCGCTCCCATCATATCCGGGA
GCCAACCCCCAGCCCGCATTTGGGGCCGCTGAGGGGCAGCCACCGGGGGCCGCCAAGCCGGCCCTTGCCC
CCAGCTTTGGCAGCTCTTTCACTTTTGGAAACTCTGCAGCCCCGGCTGCTGCACCCACACCTGCACCTCC
GTCCATGATCAAGGTCGTGCCTGCGTACGTGCCTACGCCCATCCATCCTATCTTTGGCGGTGCCACGCAC
TCGGCGTTTGGGTTGAAAGCCACGGCTTCGGCCTTCGGCGCTCCCGCCAGCTCACAGCCCGCCTTTGGCG
GCTCCACTGCTGTCTTCTTCGGTGCAGCCACCAGCTCCGGCTTTGGAGCCACCACCCAGACCGCCAGCAG
CGGGAGCAGCAGCTCGGTGTTTGGCAGCACAACACCATCACCCTTCACGTTTGGGGGTTCGGCAGCCCCC
GCTGGCAGTGGGAGCTTTGGGATCAATGTGGCCACCCCAGGCTCCAGCACCACCACCGGAGCTTTCAGCT
TTGGAGCAGGACAGAGTGGGAGCACAGCCACCTCCACCCCCTTCGCAGGGGGCTTAGGTCAGAACGCCCT
GGGCACCACCGGCCAGAGCACACCGTTTGCCTTCAACGTGAGCAGCACAACTGAGAGCAAACCTGTGTTT
GGAGGCACCGCCACCCCCACCTTTGGTCTGAACACCCCTGCGCCTGGAGTGGGCACATCAGGCAGCAGCC
TCTCCTTTGGGGCATCCTCAGCACCCGCCCAAGGCTTTGTTGGTGTTGCACCTTTCGGCAACACTTTTGC
TCACCAGCAAGAACACAGCCCGAGGAAGGGACCCAATAACCTTTCAAAACGCAAACTGCTGCCTGCGGTG
AGGGCCCAGGGTCTTCCACGGAGAGGACAGGCATCTTCCTTTCCCACCAGGAAGGAGTGA

Translation (999 aa):
MVCSPVTVRIAPPDRRFSRSAIPEQIISSTLSSPSSNAPDPCAKETVLSALKEKEKKRTVEEEDQIFLDG
QENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASGI
PSSSRNAITSSYSSTRGISQLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRE
SQGEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQ
WFNQALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQTPPSLPPCPE
SAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAE
TATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAP
SSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSAS
PSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTT
VTTFSQSLHTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPG
ANPQPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAAAPTPAPPSMIKVVPAYVPTPIHPIFGGATH
SAFGLKATASAFGAPASSQPAFGGSTAVFFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAP
AGSGSFGINVATPGSSTTTGAFSFGAGQSGSTATSTPFAGGLGQNALGTTGQSTPFAFNVSSTTESKPVF
GGTATPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGNTFAHQQEHSPRKGPNNLSKRKLLPAV
RAQGLPRRGQASSFPTRKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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