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Report for CCDS43379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43379.1 Public Homo sapiens 5 TCERG1 24 110 108 CCDS HistoryNCBI Gene:10915Re-query CCDS DB by CCDS ID:43379.1Re-query CCDS DB by GeneID:10915See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43379.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394421.7 ENSP00000377943.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394421.7Link to Ensembl Protein Viewer:ENSP00000377943.2Re-query CCDS DB by Nucleotide ID:ENST00000394421Re-query CCDS DB by Protein ID:ENSP00000377943
Original member Current member NCBI NM_001040006.2 NP_001035095.1 Accepted alive Link to Nucleotide Sequence:NM_001040006.2Link to Protein Sequence:NP_001035095.1Re-query CCDS DB by Nucleotide ID:NM_001040006Re-query CCDS DB by Protein ID:NP_001035095Link to BLAST:NP_001035095.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035095.1 1077 O14776-2 1077 100% 0 0

Chromosomal Locations for CCDS 43379.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 146447350 146447408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146455056 146455281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146457183 146457335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146458884 146459337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146463551 146463793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146469544 146469744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146470636 146470748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146471488 146471576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146478493 146478653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146479855 146479911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146480028 146480094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146482592 146482727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146483540 146483629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146492920 146493038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146498536 146498686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146503375 146503539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146503824 146504006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146507028 146507207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146507873 146507956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146509145 146509245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 146510441 146510642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3234 nt):
ATGGCGGAGCGTGGCGGGGACGGGGGCGAGAGTGAACGATTCAACCCGGGGGAGCTCAGGATGGCCCAAC
AGCAGGCCTTGAGGTTCCGAGGTCCGGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTGAT
GCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTCCT
CCTTTTGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATACCTCCACCTATGGGCCCTCCACACC
TCCAGAGACCACCTTTCATGCCTCCTCCCATGAGTTCCATGCCTCCTCCTCCGGGTATGATGTTTCCACC
AGGAATGCCTCCTGTGACTGCTCCTGGTACTCCAGCACTACCTCCTACGGAGGAGATATGGGTTGAAAAT
AAAACTCCAGATGGGAAGGTTTATTATTATAATGCTCGGACACGTGAATCTGCATGGACCAAGCCAGATG
GAGTTAAGGTTATTCAGCAATCAGAACTGACACCTATGCTTGCAGCCCAGGCACAGGTTCAGGCTCAGGC
CCAGGCGCAGGCTCAGGCCCAGGCGCAGGCTCAGGCCCAGGCACAAGCTCAGGCCCAGGCTCAGGCTCAG
GCCCAGGCCCAGGCCCAGGCCCAGGCCCAGGCCCAAGCCCAAGCCCAGGCCCAGGCTCAGGCTCAGGCAC
AAGCTCAGGCCCAGGCCCAGGCTCAGGTCCAGGCCCAGGTCCAGGCACAAGTGCAAGCACAAGCAGTTGG
AGCTTCCACCCCTACGACCAGTAGCCCAGCACCTGCAGTATCCACTTCAACATCATCATCCACCCCTTCC
TCTACCACTTCTACCACAACAACTGCTACTTCAGTTGCGCAGACAGTATCAACACCCACAACACAAGATC
AGACCCCAAGTTCTGCTGTTTCAGTTGCCACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACAGCCAC
ACCTGTGCAAACCGTTCCCCAGCCGCACCCTCAGACGTTACCTCCTGCTGTTCCTCATTCAGTACCTCAG
CCAACAACAGCAATACCTGCTTTTCCACCAGTAATGGTACCTCCGTTTCGTGTTCCCCTTCCTGGCATGC
CAATTCCACTTCCAGGTGTATTGCCAGGAATGGCCCCTCCTATCGTACCCATGATACATCCCCAGGTTGC
TATTGCAGCTTCACCTGCTACCTTAGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAAAACAGCA
GATGGGAAGACATATTATTATAATAATAGAACATTAGAATCAACCTGGGAAAAACCCCAAGAACTAAAGG
AAAAAGAAAAGTTAGAAGAGAAGATTAAAGAGCCAATTAAAGAACCCTCTGAAGAGCCTCTGCCAATGGA
GACGGAGGAGGAGGATCCTAAAGAAGAGCCTATAAAGGAGATAAAGGAGGAGCCCAAAGAAGAGGAGATG
ACTGAAGAAGAAAAGGCTGCCCAGAAGGCAAAGCCAGTTGCTACTGCTCCTATTCCTGGTACTCCATGGT
GTGTCGTTTGGACTGGTGATGAGCGGGTCTTCTTTTATAATCCCACCACTCGTCTTTCTATGTGGGACCG
ACCTGATGATCTGATTGGCAGGGCAGATGTTGACAAAATTATTCAGGAGCCCCCTCATAAAAAAGGAATG
GAGGAATTGAAGAAACTAAGGCACCCAACTCCGACAATGCTGTCGATCCAAAAGTGGCAATTCTCTATGA
GTGCAATTAAAGAGGAACAAGAATTAATGGAAGAAATTAATGAAGATGAGCCTGTTAAAGCAAAAAAACG
GAAGAGAGACGATAATAAAGACATTGACTCAGAGAAAGAAGCTGCCATGGAAGCTGAAATTAAAGCTGCC
CGAGAAAGGGCCATTGTCCCTCTGGAGGCTCGAATGAAGCAGTTCAAGGACATGCTGCTAGAGAGAGGGG
TGTCTGCTTTTTCAACGTGGGAGAAGGAGTTGCACAAGATAGTTTTTGATCCCCGGTACTTACTTCTCAA
TCCTAAAGAGAGAAAACAGGTGTTTGATCAGTATGTAAAGACCAGGGCAGAGGAAGAACGCAGGGAAAAG
AAAAATAAAATAATGCAAGCCAAGGAAGATTTCAAAAAAATGATGGAAGAAGCAAAATTTAATCCAAGAG
CAACTTTTAGTGAATTTGCAGCCAAGCATGCTAAAGATTCAAGATTCAAAGCAATTGAAAAGATGAAAGA
CCGAGAAGCCTTGTTTAATGAGTTTGTGGCCGCTGCTAGGAAGAAAGAGAAAGAAGATTCGAAGACCAGA
GGTGAGAAGATTAAATCGGATTTCTTTGAACTATTATCTAATCATCACTTGGACAGTCAGTCTCGATGGA
GCAAAGTAAAAGACAAAGTAGAAAGTGATCCACGTTACAAAGCAGTAGATAGTTCATCAATGAGAGAAGA
CCTTTTCAAACAGTACATTGAAAAAATAGCCAAGAATTTAGACTCAGAAAAAGAAAAGGAGCTTGAAAGG
CAAGCCCGCATTGAGGCAAGCCTTCGAGAACGAGAAAGGGAGGTTCAAAAGGCCCGTTCAGAACAAACAA
AAGAAATAGATCGAGAGAGAGAGCAGCACAAACGAGAAGAAGCTATCCAGAATTTCAAAGCTCTTCTGTC
TGACATGGTACGTTCTTCAGATGTGTCATGGTCTGATACTCGTAGGACCCTCCGAAAAGATCACCGCTGG
GAATCTGGATCCTTATTGGAAAGAGAGGAGAAAGAGAAGCTTTTTAATGAACACATTGAAGCACTTACCA
AAAAAAAGAGAGAGCACTTTAGGCAACTTCTGGATGAAACTTCTGCAATTACCTTAACATCCACGTGGAA
AGAAGTAAAAAAAATCATTAAGGAAGATCCTCGATGTATTAAGTTCTCCTCCAGTGACAGGAAAAAACAA
AGAGAATTTGAAGAATATATCAGAGACAAATATATCACAGCCAAAGCTGACTTCAGGACGCTTTTGAAAG
AGACCAAATTTATAACATATAGATCCAAAAAATTAATCCAAGAATCAGATCAGCACCTGAAAGATGTAGA
AAAAATTTTACAGAATGACAAACGGTATCTAGTACTGGACTGTGTGCCAGAGGAGAGGCGTAAACTGATT
GTGGCATATGTTGATGACCTGGATCGCCGGGGTCCACCCCCACCTCCCACAGCATCGGAGCCCACGAGAC
GATCAACAAAATAA

Translation (1077 aa):
MAERGGDGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRP
PFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVEN
KTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQ
AQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPS
STTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQ
PTTAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTA
DGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEEPKEEEM
TEEEKAAQKAKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGM
EELKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEINEDEPVKAKKRKRDDNKDIDSEKEAAMEAEIKAA
RERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERREK
KNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTR
GEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELER
QARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRW
ESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQ
REFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLI
VAYVDDLDRRGPPPPPTASEPTRRSTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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