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Report for CCDS35297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35297.1 Public Homo sapiens X FAM156A 24 110 108 CCDS HistoryNCBI Gene:29057Re-query CCDS DB by CCDS ID:35297.1Re-query CCDS DB by GeneID:29057See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35297.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000596733.7 ENSP00000471676.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596733.7Link to Ensembl Protein Viewer:ENSP00000471676.1Re-query CCDS DB by Nucleotide ID:ENST00000596733Re-query CCDS DB by Protein ID:ENSP00000471676
Original member Current member EBI ENST00000622323.5 ENSP00000477905.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622323.5Link to Ensembl Protein Viewer:ENSP00000477905.2Re-query CCDS DB by Nucleotide ID:ENST00000622323Re-query CCDS DB by Protein ID:ENSP00000477905
Original member Current member EBI ENST00000615092.4 ENSP00000479184.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615092.4Link to Ensembl Protein Viewer:ENSP00000479184.1Re-query CCDS DB by Nucleotide ID:ENST00000615092Re-query CCDS DB by Protein ID:ENSP00000479184
Original member Current member EBI ENST00000622732.5 ENSP00000479338.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622732.5Link to Ensembl Protein Viewer:ENSP00000479338.2Re-query CCDS DB by Nucleotide ID:ENST00000622732Re-query CCDS DB by Protein ID:ENSP00000479338
Original member Current member EBI ENST00000612846.5 ENSP00000479348.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612846.5Link to Ensembl Protein Viewer:ENSP00000479348.2Re-query CCDS DB by Nucleotide ID:ENST00000612846Re-query CCDS DB by Protein ID:ENSP00000479348
Original member Current member EBI ENST00000619586.5 ENSP00000479822.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619586.5Link to Ensembl Protein Viewer:ENSP00000479822.2Re-query CCDS DB by Nucleotide ID:ENST00000619586Re-query CCDS DB by Protein ID:ENSP00000479822
Original member Current member EBI ENST00000613284.1 ENSP00000480373.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613284.1Link to Ensembl Protein Viewer:ENSP00000480373.1Re-query CCDS DB by Nucleotide ID:ENST00000613284Re-query CCDS DB by Protein ID:ENSP00000480373
Original member Current member EBI ENST00000611661.4 ENSP00000480518.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611661.4Link to Ensembl Protein Viewer:ENSP00000480518.1Re-query CCDS DB by Nucleotide ID:ENST00000611661Re-query CCDS DB by Protein ID:ENSP00000480518
Original member Current member EBI ENST00000617970.4 ENSP00000481435.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617970.4Link to Ensembl Protein Viewer:ENSP00000481435.1Re-query CCDS DB by Nucleotide ID:ENST00000617970Re-query CCDS DB by Protein ID:ENSP00000481435
Original member Current member EBI ENST00000622197.5 ENSP00000481568.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622197.5Link to Ensembl Protein Viewer:ENSP00000481568.2Re-query CCDS DB by Nucleotide ID:ENST00000622197Re-query CCDS DB by Protein ID:ENSP00000481568
Original member Current member EBI ENST00000622447.5 ENSP00000482142.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000622447.5Link to Ensembl Protein Viewer:ENSP00000482142.1Re-query CCDS DB by Nucleotide ID:ENST00000622447Re-query CCDS DB by Protein ID:ENSP00000482142
Original member Current member EBI ENST00000619518.5 ENSP00000482562.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619518.5Link to Ensembl Protein Viewer:ENSP00000482562.2Re-query CCDS DB by Nucleotide ID:ENST00000619518Re-query CCDS DB by Protein ID:ENSP00000482562
Original member Current member EBI ENST00000618601.5 ENSP00000482980.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618601.5Link to Ensembl Protein Viewer:ENSP00000482980.2Re-query CCDS DB by Nucleotide ID:ENST00000618601Re-query CCDS DB by Protein ID:ENSP00000482980
Original member Current member EBI ENST00000612915.4 ENSP00000484167.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612915.4Link to Ensembl Protein Viewer:ENSP00000484167.1Re-query CCDS DB by Nucleotide ID:ENST00000612915Re-query CCDS DB by Protein ID:ENSP00000484167
Original member Current member EBI ENST00000610625.5 ENSP00000484486.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610625.5Link to Ensembl Protein Viewer:ENSP00000484486.2Re-query CCDS DB by Nucleotide ID:ENST00000610625Re-query CCDS DB by Protein ID:ENSP00000484486
Original member Current member EBI ENST00000619373.5 ENSP00000484757.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619373.5Link to Ensembl Protein Viewer:ENSP00000484757.2Re-query CCDS DB by Nucleotide ID:ENST00000619373Re-query CCDS DB by Protein ID:ENSP00000484757
Original member Current member EBI ENST00000612083.5 ENSP00000484967.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612083.5Link to Ensembl Protein Viewer:ENSP00000484967.2Re-query CCDS DB by Nucleotide ID:ENST00000612083Re-query CCDS DB by Protein ID:ENSP00000484967
Original member Current member EBI ENST00000623782.3 ENSP00000485247.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623782.3Link to Ensembl Protein Viewer:ENSP00000485247.1Re-query CCDS DB by Nucleotide ID:ENST00000623782Re-query CCDS DB by Protein ID:ENSP00000485247
Original member Current member NCBI NM_001242489.2 NP_001229418.1 Accepted alive Link to Nucleotide Sequence:NM_001242489.2Link to Protein Sequence:NP_001229418.1Re-query CCDS DB by Nucleotide ID:NM_001242489Re-query CCDS DB by Protein ID:NP_001229418Link to BLAST:NP_001229418.1
Original member Current member NCBI NM_001242490.2 NP_001229419.1 Accepted alive Link to Nucleotide Sequence:NM_001242490.2Link to Protein Sequence:NP_001229419.1Re-query CCDS DB by Nucleotide ID:NM_001242490Re-query CCDS DB by Protein ID:NP_001229419Link to BLAST:NP_001229419.1
Original member Current member NCBI NM_001242491.1 NP_001229420.1 Accepted alive Link to Nucleotide Sequence:NM_001242491.1Link to Protein Sequence:NP_001229420.1Re-query CCDS DB by Nucleotide ID:NM_001242491Re-query CCDS DB by Protein ID:NP_001229420Link to BLAST:NP_001229420.1
Original member Current member NCBI NM_001242492.2 NP_001229421.1 Accepted alive Link to Nucleotide Sequence:NM_001242492.2Link to Protein Sequence:NP_001229421.1Re-query CCDS DB by Nucleotide ID:NM_001242492Re-query CCDS DB by Protein ID:NP_001229421Link to BLAST:NP_001229421.1
Original member Current member NCBI NM_001242493.2 NP_001229422.1 Accepted alive Link to Nucleotide Sequence:NM_001242493.2Link to Protein Sequence:NP_001229422.1Re-query CCDS DB by Nucleotide ID:NM_001242493Re-query CCDS DB by Protein ID:NP_001229422Link to BLAST:NP_001229422.1
Original member Current member NCBI NM_001242494.2 NP_001229423.1 Accepted alive Link to Nucleotide Sequence:NM_001242494.2Link to Protein Sequence:NP_001229423.1Re-query CCDS DB by Nucleotide ID:NM_001242494Re-query CCDS DB by Protein ID:NP_001229423Link to BLAST:NP_001229423.1
Original member Current member NCBI NM_001242495.2 NP_001229424.1 Accepted alive Link to Nucleotide Sequence:NM_001242495.2Link to Protein Sequence:NP_001229424.1Re-query CCDS DB by Nucleotide ID:NM_001242495Re-query CCDS DB by Protein ID:NP_001229424Link to BLAST:NP_001229424.1
Original member Current member NCBI NM_001242496.2 NP_001229425.1 Accepted alive Link to Nucleotide Sequence:NM_001242496.2Link to Protein Sequence:NP_001229425.1Re-query CCDS DB by Nucleotide ID:NM_001242496Re-query CCDS DB by Protein ID:NP_001229425Link to BLAST:NP_001229425.1
Original member Current member NCBI NM_001242497.2 NP_001229426.1 Accepted alive Link to Nucleotide Sequence:NM_001242497.2Link to Protein Sequence:NP_001229426.1Re-query CCDS DB by Nucleotide ID:NM_001242497Re-query CCDS DB by Protein ID:NP_001229426Link to BLAST:NP_001229426.1
Original member Current member NCBI NM_001377060.1 NP_001363989.1 Accepted alive Link to Nucleotide Sequence:NM_001377060.1Link to Protein Sequence:NP_001363989.1Re-query CCDS DB by Nucleotide ID:NM_001377060Re-query CCDS DB by Protein ID:NP_001363989Link to BLAST:NP_001363989.1
Original member Current member NCBI NM_001377061.1 NP_001363990.1 Accepted alive Link to Nucleotide Sequence:NM_001377061.1Link to Protein Sequence:NP_001363990.1Re-query CCDS DB by Nucleotide ID:NM_001377061Re-query CCDS DB by Protein ID:NP_001363990Link to BLAST:NP_001363990.1
Original member Current member NCBI NM_001377062.1 NP_001363991.1 Accepted alive Link to Nucleotide Sequence:NM_001377062.1Link to Protein Sequence:NP_001363991.1Re-query CCDS DB by Nucleotide ID:NM_001377062Re-query CCDS DB by Protein ID:NP_001363991Link to BLAST:NP_001363991.1
Original member Current member NCBI NM_001377063.1 NP_001363992.1 Accepted alive Link to Nucleotide Sequence:NM_001377063.1Link to Protein Sequence:NP_001363992.1Re-query CCDS DB by Nucleotide ID:NM_001377063Re-query CCDS DB by Protein ID:NP_001363992Link to BLAST:NP_001363992.1
Original member Current member NCBI NM_001387706.1 NP_001374635.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387706.1Link to Protein Sequence:NP_001374635.1Re-query CCDS DB by Nucleotide ID:NM_001387706Re-query CCDS DB by Protein ID:NP_001374635Link to BLAST:NP_001374635.1
Original member Current member NCBI NM_014138.5 NP_054857.2 Accepted alive Link to Nucleotide Sequence:NM_014138.5Link to Protein Sequence:NP_054857.2Re-query CCDS DB by Nucleotide ID:NM_014138Re-query CCDS DB by Protein ID:NP_054857Link to BLAST:NP_054857.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229418.1 213 Q8NDB6 213 100% 0 0
NP_001229419.1 213 Q8NDB6 213 100% 0 0
NP_001229420.1 213 Q8NDB6 213 100% 0 0
NP_001229421.1 213 Q8NDB6 213 100% 0 0
NP_001229422.1 213 Q8NDB6 213 100% 0 0
NP_001229423.1 213 Q8NDB6 213 100% 0 0
NP_001229424.1 213 Q8NDB6 213 100% 0 0
NP_001229425.1 213 Q8NDB6 213 100% 0 0
NP_001229426.1 213 Q8NDB6 213 100% 0 0
NP_001363989.1 213 Q8NDB6 213 100% 0 0
NP_001363990.1 213 Q8NDB6 213 100% 0 0
NP_001363991.1 213 Q8NDB6 213 100% 0 0
NP_001363992.1 213 Q8NDB6 213 100% 0 0
NP_001374635.1 213 Q8NDB6 213 100% 0 0
NP_054857.2 213 Q8NDB6 213 100% 0 0

Chromosomal Locations for CCDS 35297.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 52947947 52948588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGATCCACTCCAGAAACGGAATCCAGCATCGCCTTCCAAATCTTCCCCGATGACAGCTGCAGAGACTT
CCCAGGAAGGTCCAGCGCCCTCTCAGCCTTCGTACTCAGAACAGCCGATGATGGGCCTCAGTAACCTGAG
CCCCGGTCCTGGCCCCAGCCAGGCCGTGCCTCTCCCAGAGGGGCTGCTCCGCCAGCGGTACAGAGAGGAG
AAGACCCTGGAAGAGCGGCGGTGGGAGAGGCTGGAGTTCCTTCAGAGGAAGAAAGCATTCCTGCGGCATG
TGAGGAGGAGACACCGCGATCACATGGCCCCCTATGCTGTTGGGAGGGAAGCCAGAATCTCCCCATTAGG
TGACAGAAGTCAGAATCGATTCCGATGTGAATGTCGATACTGCCAGAGCCACAGGCCGAATCTTTCTGGG
ATCCCTGGGGAGAGTAACAGGGCCCCACATCCCTCCTCCTGGGAGACGCTGGTGCAGGGCCTCAGTGGCT
TGACTCTCAGCCTAGGCACCAACCAGCCCGGGCCTCTGCCTGAAGCGGCACTCCAGCCACAGGAGACAGA
GGAGAAGCGCCAGCGAGAGAGGCAGCAGGAGAGCAAAATAATGTTTCAGAGGCTGCTCAAGCAGTGGTTA
GAGGAAAACTGA

Translation (213 aa):
MDPLQKRNPASPSKSSPMTAAETSQEGPAPSQPSYSEQPMMGLSNLSPGPGPSQAVPLPEGLLRQRYREE
KTLEERRWERLEFLQRKKAFLRHVRRRHRDHMAPYAVGREARISPLGDRSQNRFRCECRYCQSHRPNLSG
IPGESNRAPHPSSWETLVQGLSGLTLSLGTNQPGPLPEAALQPQETEEKRQRERQQESKIMFQRLLKQWL
EEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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