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Report for CCDS44938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44938.1 Public Homo sapiens 12 MDM1 24 110 108 CCDS HistoryNCBI Gene:56890Re-query CCDS DB by CCDS ID:44938.1Re-query CCDS DB by GeneID:56890See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44938.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430606.3 ENSP00000408694.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430606.3Link to Ensembl Protein Viewer:ENSP00000408694.2Re-query CCDS DB by Nucleotide ID:ENST00000430606Re-query CCDS DB by Protein ID:ENSP00000408694
Original member Current member NCBI NM_020128.4 NP_064513.1 Accepted alive Link to Nucleotide Sequence:NM_020128.4Link to Protein Sequence:NP_064513.1Re-query CCDS DB by Nucleotide ID:NM_020128Re-query CCDS DB by Protein ID:NP_064513Link to BLAST:NP_064513.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064513.1 222 Q8TC05-2 222 100% 0 0

Chromosomal Locations for CCDS 44938.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 68326486 68327021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68331107 68331221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68332228 68332245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGCCGGTGCGCTTCAAGGGGCTGAGTGAATACCAGAGGAACTTCCTGTGGAAAAAGTCTTATTTGTCCG
AGTCTTGTAATTCCTCCGTGGGGCGAAAGTACCCATGGGCTGGACTTAGATCAGATCAATTAGGCATCAC
GAAAGAGCCAAGTTTTATTTCAAAAAGAAGAGTCCCTTACCATGACCCACAGATTTCAAAATCTCTGGAG
TGGAATGGAGCTATCTCAGAGAGCAATGTGGTTGCATCACCAGAACCAGAAGCCCCGGAAACACCAAAAT
CACAAGAAGCAGAACAAAAGGATGTTACTCAAGAAAGAGTTCACTCACTAGAAGCTTCCAGGGTTCCCAA
AAGAACCAGATCTCACTCTGCAGACTCCAGAGCTGAAGGGGCTTCAGATGTGGAAAATAATGAGGGTGTA
ACAAACCATACACCAGTTAATGAAAATGTGGAACTGGAACATTCTACCAAGGTTCTTTCAGAAAATGTAG
ATAATGGGGTAGGCATATTCACTGCATTTCTTTTCAAAAGCATAGAATTCTTCATTGGTTTCATTGTCAT
TTCTGTAATATTACATTTTGTGTTTCAGAATTTTCCATTGTTGTTTTCTTGTCTAATGTCTATAAGAATA
GTTGATAACAGGCTGTTGACTTTAGTTATTGTGAATTAG

Translation (222 aa):
MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPYHDPQISKSLE
WNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGV
TNHTPVNENVELEHSTKVLSENVDNGVGIFTAFLFKSIEFFIGFIVISVILHFVFQNFPLLFSCLMSIRI
VDNRLLTLVIVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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