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Report for CCDS8614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8614.1 Public Homo sapiens 12 CLEC7A 24 110 108 CCDS HistoryNCBI Gene:64581Re-query CCDS DB by CCDS ID:8614.1Re-query CCDS DB by GeneID:64581See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396484.6 ENSP00000379743.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396484.6Link to Ensembl Protein Viewer:ENSP00000379743.2Re-query CCDS DB by Nucleotide ID:ENST00000396484Re-query CCDS DB by Protein ID:ENSP00000379743
Original member Current member NCBI NM_197950.3 NP_922941.1 Accepted alive Link to Nucleotide Sequence:NM_197950.3Link to Protein Sequence:NP_922941.1Re-query CCDS DB by Nucleotide ID:NM_197950Re-query CCDS DB by Protein ID:NP_922941Link to BLAST:NP_922941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_922941.1 168 Q9BXN2-5 168 100% 0 0

Chromosomal Locations for CCDS 8614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10118458 10118590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10123245 10123363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10125297 10125448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10129980 10130082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGGAATATCATCCTGATTTAGAAAATTTGGATGAAGATGGATATACTCAATTACACTTCGACTCTCAAA
GCAATACCAGGATAGCTGTTGTTTCAGAGAAAGGGGTTCTTTCCAGCCCTTGTCCTCCTAATTGGATTAT
ATATGAGAAGAGCTGTTATCTATTCAGCATGTCACTAAATTCCTGGGATGGAAGTAAAAGACAATGCTGG
CAACTGGGCTCTAATCTCCTAAAGATAGACAGCTCAAATGAATTGGGATTTATAGTAAAACAAGTGTCTT
CCCAACCTGATAATTCATTTTGGATAGGCCTTTCTCGGCCCCAGACTGAGGTACCATGGCTCTGGGAGGA
TGGATCAACATTCTCTTCTAACTTATTTCAGATCAGAACCACAGCTACCCAAGAAAACCCATCTCCAAAT
TGTGTATGGATTCACGTGTCAGTCATTTATGACCAACTGTGTAGTGTGCCCTCATATAGTATTTGTGAGA
AGAAGTTTTCAATGTAA

Translation (168 aa):
MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCW
QLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPN
CVWIHVSVIYDQLCSVPSYSICEKKFSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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