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Report for CCDS73348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73348.1 Public Homo sapiens 11 GVQW3 24 110 108 CCDS HistoryNCBI Gene:100506127Re-query CCDS DB by CCDS ID:73348.1Re-query CCDS DB by GeneID:100506127See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 73348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321844.6 ENSP00000323821.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321844.6Link to Ensembl Protein Viewer:ENSP00000323821.4Re-query CCDS DB by Nucleotide ID:ENST00000321844Re-query CCDS DB by Protein ID:ENSP00000323821
Original member Current member NCBI NM_001282456.4 NP_001269385.1 Accepted alive Link to Nucleotide Sequence:NM_001282456.4Link to Protein Sequence:NP_001269385.1Re-query CCDS DB by Nucleotide ID:NM_001282456Re-query CCDS DB by Protein ID:NP_001269385Link to BLAST:NP_001269385.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269385.1 254 Q3ZCU0-1 254 100% 0 0

Chromosomal Locations for CCDS 73348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 76381829 76382210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76403660 76404042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGAGTGACCGCTATTTAGAACAAAGGATTAGTATCAAATTTTGCGTGAAATTGAACAAGTCTGCAAGTG
AGACCCACCATCTTTTAAAAGAAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTTGACTGGCA
CAAAAGGTTTAAAGAAGGACGGGAAGATGTTCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGA
ACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGATGATGG
CTGAAGAGTTAAATTTAGACAAAGAAACTGTTAGGCTCATTTTGAAAGAAAACTTGAACATGAGGAAGAT
TTCTGCAAAAGTTATTTCGGGTGTTTTGAAGGAGACGGAACCTCACTATGTTGCCCAGGCTGGTCTCGAA
CTCCTTGTCTCAAGGGATCCTCCCACCTTGGCCTCCCAAAGCTCTGGGATTATCAGCATGAGCCACCATG
CCAAGCCAAAACCAGGAGTTCAATGGTGTAAATTCCAGTCTGAGTCCACAGGCCGAAGAGCGAGGAGTGC
TGATGTACAAGGGCAGGAGAAGATGGATGTCACAGCTCAAGAAGCGAGAACAAATTTGCCCTTCTATCTT
TTTGTTCTATTCAGGTCCTCAATGAATTGGATGATGTCCATGCACATTAGGGAGGGCTGCCTCTTCATTA
CTCGGTCTACCAATTCAAATGCTAATCTCTTCCGGAAACATCCCCACAGACACACCCAGAAATAA

Translation (254 aa):
MSDRYLEQRISIKFCVKLNKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHR
TDDNIQKVKDLVCSNRQLTVRMMAEELNLDKETVRLILKENLNMRKISAKVISGVLKETEPHYVAQAGLE
LLVSRDPPTLASQSSGIISMSHHAKPKPGVQWCKFQSESTGRRARSADVQGQEKMDVTAQEARTNLPFYL
FVLFRSSMNWMMSMHIREGCLFITRSTNSNANLFRKHPHRHTQK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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