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Report for CCDS33146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33146.1 Public Homo sapiens 2 GREB1 24 110 108 CCDS HistoryNCBI Gene:9687Re-query CCDS DB by CCDS ID:33146.1Re-query CCDS DB by GeneID:9687See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381483.6 ENSP00000370892.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381483.6Link to Ensembl Protein Viewer:ENSP00000370892.2Re-query CCDS DB by Nucleotide ID:ENST00000381483Re-query CCDS DB by Protein ID:ENSP00000370892
Original member Current member NCBI NM_033090.3 NP_149081.1 Accepted alive Link to Nucleotide Sequence:NM_033090.3Link to Protein Sequence:NP_149081.1Re-query CCDS DB by Nucleotide ID:NM_033090Re-query CCDS DB by Protein ID:NP_149081Link to BLAST:NP_149081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149081.1 457 Q4ZG55-2 457 100% 0 0

Chromosomal Locations for CCDS 33146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 11556615 11556771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11562463 11562582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11566480 11566656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11576353 11576535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11578297 11578431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11580704 11580832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11585161 11585274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11585762 11585905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11588746 11588931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 11591396 11591424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGGGAAATTCTTACGCTGGACAGCTGAAGACGACACGCTTTGAAGAGGTCTTGCACAATTCCATCGAGG
CATCCCTGCGGTCCAACAACCTGGTGCCCAGGCCCATCTTTTCCCAGCTGTACCTGGAAGCTGAGCAGCA
GCTTGCCGCTCTAGAAGGTGGTAGCCGAGTGGACAATGAGGAAGAGGAAGAAGAGGGAGAAGGAGGGCTG
GAAACAAATGGCCCCCCAAACCCTTTCCAGCTGCACCCTCTGCCTGAAGGATGCTGTACCACAGACGGGT
TTTGCCAGGCCGGGAAGGACCTGCGCCTTGTCTCCATTTCCAACGAGCCCATGGATGTCCCTGCGGGCTT
TCTCCTCGTGGGGGTCAAGTCCCCCAGCCTGCCGGACCATCTCCTGGTGTGCGCCGTTGACAAGAGGTTC
TTGCCAGATGACAATGGCCACAATGCTCTTCTTGGTTTCTCTGGGAATTGTGTTGGCTGTGGAAAGAAAG
GCTTCTGTTACTTCACGGAATTCTCCAATCATATAAATCTGAAACTGACCACTCAACCCAAGAAGCAGAA
ACACTTGAAGTATTACCTGGTCCGTAATGCACAAGGGACTCTAACCAAAGGACCTTTAATCTGTTGGAAA
GGCTCAGAGTTTAGAAGCCGGCAGATCCCCGCCAGTACTTGTTCCAGTTCCCTCTTCCCAGCCCTGGAGA
GCACGGCTGCCTTCCCCAGCGAGCCCGTTCCTGGGACGAACCCCAGCATCCTGATGGGAGCTCAGCAGGC
AGGACCAGCTTCTGATCACCCCTCACTAAACGCAGCAATGGGTCCGGCTGTTTTCAACGGCAAAGATTCC
CCGAAGTGCCAACAACTGGCAAAGAATAACCTGTTGGCCCTGCCGCGACCATCGGCTTTAGGTATCTTGT
CAAACTCCGGGCCCCCCAAAAAACGCCACAAAGGGTGGTCTCCAGAATCTCCATCAGCTCCAGATGGTGG
CTGCCCCCAAGGTGGTGGGAACAGAGCTAAGTATGAGAGCGCAGGCATGTCCTGCGTGCCGCAGGTTGGC
TTGGTGGGACCAGCTTCAGTCACCTTTCCAGTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGACAACT
TGCTGAAAATATGCAAGGCCAAGCCAGTGATATTTAAAGGCCATGGGAACTTCCCTTACCTCTGTGGGAA
CCTGAATGACGTCGTGGTCAGCCCCCTCTTGTACACGTGCTACCAGAATTCCCAGTCTGTCTCACGGGCA
TACGAGCAGTACGGCGCCTCTGCCATCCAGCCCATCTCCGAGGAGATGCAGCTCCTGCTTACCGTCTACT
ACCTGGTCCAGCTGGCACATCAAATACGAAATCCGGACGTATAA

Translation (457 aa):
MGNSYAGQLKTTRFEEVLHNSIEASLRSNNLVPRPIFSQLYLEAEQQLAALEGGSRVDNEEEEEEGEGGL
ETNGPPNPFQLHPLPEGCCTTDGFCQAGKDLRLVSISNEPMDVPAGFLLVGVKSPSLPDHLLVCAVDKRF
LPDDNGHNALLGFSGNCVGCGKKGFCYFTEFSNHINLKLTTQPKKQKHLKYYLVRNAQGTLTKGPLICWK
GSEFRSRQIPASTCSSSLFPALESTAAFPSEPVPGTNPSILMGAQQAGPASDHPSLNAAMGPAVFNGKDS
PKCQQLAKNNLLALPRPSALGILSNSGPPKKRHKGWSPESPSAPDGGCPQGGGNRAKYESAGMSCVPQVG
LVGPASVTFPVVASGEPVSVPDNLLKICKAKPVIFKGHGNFPYLCGNLNDVVVSPLLYTCYQNSQSVSRA
YEQYGASAIQPISEEMQLLLTVYYLVQLAHQIRNPDV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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