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Report for CCDS42549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42549.1 Public Homo sapiens 19 DMKN 24 110 108 CCDS HistoryNCBI Gene:93099Re-query CCDS DB by CCDS ID:42549.1Re-query CCDS DB by GeneID:93099See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42549.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408915.6 ENSP00000386225.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408915.6Link to Ensembl Protein Viewer:ENSP00000386225.2Re-query CCDS DB by Nucleotide ID:ENST00000408915Re-query CCDS DB by Protein ID:ENSP00000386225
Original member Current member NCBI NM_001035516.4 NP_001030593.2 Accepted alive Link to Nucleotide Sequence:NM_001035516.4Link to Protein Sequence:NP_001030593.2Re-query CCDS DB by Nucleotide ID:NM_001035516Re-query CCDS DB by Protein ID:NP_001030593Link to BLAST:NP_001030593.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001030593.2 90 Q6E0U4-15 90 100% 0 0

Chromosomal Locations for CCDS 42549.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35498716 35498763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35498874 35498897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35499958 35500029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35500533 35500580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35501823 35501903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGAACATGAAGCCGGCCACTGCCTCTGCTCTGCTCCTGCTCCTGCTGGGCCTGGCCTGGACCCAGGGGA
GCCACGGCTGGGGTGCGGACGCGTCATCACTGCAGAAACGTGCAGGCAGAGACGATCAGAACTACAATTA
CAACCAGCATGCGTATCCCACTGCCTATGGTGGGAAGTACTCAGTCAAGACCCCTGCAAAGGGGGGAGTC
TCACCTTCTTCCTCGGCTTCCCGGGTGCAACCTGGCCTGCTGCAGTGGGTGAAGTTTTGGTAG

Translation (90 aa):
MNMKPATASALLLLLLGLAWTQGSHGWGADASSLQKRAGRDDQNYNYNQHAYPTAYGGKYSVKTPAKGGV
SPSSSASRVQPGLLQWVKFW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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