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Report for CCDS46043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46043.1 Public Homo sapiens 19 ZNF181 24 110 108 CCDS HistoryNCBI Gene:339318Re-query CCDS DB by CCDS ID:46043.1Re-query CCDS DB by GeneID:339318See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000459757.6 ENSP00000419435.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000459757.6Link to Ensembl Protein Viewer:ENSP00000419435.1Re-query CCDS DB by Nucleotide ID:ENST00000459757Re-query CCDS DB by Protein ID:ENSP00000419435
Original member Current member NCBI NM_001145665.2 NP_001139137.1 Accepted alive Link to Nucleotide Sequence:NM_001145665.2Link to Protein Sequence:NP_001139137.1Re-query CCDS DB by Nucleotide ID:NM_001145665Re-query CCDS DB by Protein ID:NP_001139137Link to BLAST:NP_001139137.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139137.1 570 Q2M3W8-3 570 100% 0 0

Chromosomal Locations for CCDS 46043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34735038 34735046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34739148 34739268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34739526 34739621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34740611 34742097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGCCTCAGGTGACATTTAATGATGTGGCTATAGACTTCACTCATGAAGAGTGGGGATGGCTCAGTTCTG
CTCAGAGGGACTTATACAAGGATGTGATGGTCCAGAATTATGAGAACCTGGTCTCTGTAGGTCTTTCTGT
AACTAAGCCATATGTGATCACGTTATTGGAGGATGGAAAAGAGCCCTGGATGATGGAGAAAAAACTGTCA
AAAGGTATGATTCCAGATTGGGAATCAAGATGGGAAAACAAGGAATTATCAACAAAGAAGGATAATTATG
ATGAAGATTCACCCCAAACAGTAATAATAGAAAAAGTTGTAAAACAAAGTTATGAATTTTCAAATTCTAA
GAAGAATTTGGAATATATAGAGAAGTTGGAAGGGAAGCATGGAAGTCAGGTAGACCATTTCAGACCAGCA
ATTCTCACCTCTAGAGAAAGCCCCACTGCAGACAGTGTTTACAAATACAATATATTTAGAAGCACCTTTC
ATTCAAAGTCTACTCTTTCTGAACCACAAAAAATTTCTGCTGAAGGGAATTCACACAAATATGATATATT
AAAGAAGAACTTACCAAAAAAGTCAGTTATAAAAAATGAGAAAGTCAATGGTGGAAAGAAACTTTTGAAT
TCTAATAAAAGTGGGGCAGCCTTCAGCCAGGGCAAATCTCTTACCCTTCCCCAGACTTGTAATAGAGAGA
AAATCTATACATGCAGTGAATGTGGGAAAGCCTTTGGCAAACAGTCAATCCTCAATCGCCACTGGAGAAT
TCATACAGGAGAGAAGCCCTATGAATGTCGTGAATGTGGGAAGACTTTTAGCCATGGCTCATCCCTTACA
CGACATCTGATAAGCCATAGTGGAGAGAAACCTTACAAATGTATTGAATGTGGGAAGGCCTTTAGCCATG
TCTCATCACTTACTAACCATCAGAGCACTCACACTGGAGAGAAACCATATGAATGTATGAACTGTGGAAA
GTCTTTTAGTCGTGTGTCCCATCTTATTGAACATCTAAGAATTCATACTCAAGAAAAACTCTATGAGTGT
CGTATATGTGGAAAGGCCTTCATTCATAGGTCATCTCTCATTCACCATCAGAAAATCCATACTGGAGAGA
AGCCTTATGAATGTAGAGAATGTGGGAAAGCTTTCTGCTGTAGCTCACACCTTACTCGACATCAAAGAAT
TCACACTATGGAGAAACAATATGAATGCAACAAATGTCTGAAAGTCTTTAGTAGCCTCTCATTTCTTGTT
CAGCATCAGAGTATTCATACTGAAGAAAAACCCTTTGAATGTCAGAAATGCAGGAAATCCTTCAACCAGC
TTGAATCACTGAATATGCATTTGAGAAATCACATTAGATTGAAACCCTACGAATGCAGTATATGTGGGAA
AGCCTTTAGTCATAGGTCATCCCTGCTTCAACATCACAGAATTCATACTGGAGAGAAACCTTATGAATGT
ATTAAATGTGGGAAGACCTTCAGCTGTAGTTCAAACCTTACCGTACATCAGAGAATTCACACTGGAGAAA
AGCCATATAAATGTAATGAGTGTGGGAAAGCTTTTAGCAAAGGCTCAAATCTTACTGCCCATCAAAGAGT
ACATAATGGAGAGAAACCCAATAGTGTGGTAAGTGTGGAAAAGCCTTTAGACTATATGAATCACTATACA
TGTGAGAAATCTTACAGAAGAGAAACTGTATGA

Translation (570 aa):
MPQVTFNDVAIDFTHEEWGWLSSAQRDLYKDVMVQNYENLVSVGLSVTKPYVITLLEDGKEPWMMEKKLS
KGMIPDWESRWENKELSTKKDNYDEDSPQTVIIEKVVKQSYEFSNSKKNLEYIEKLEGKHGSQVDHFRPA
ILTSRESPTADSVYKYNIFRSTFHSKSTLSEPQKISAEGNSHKYDILKKNLPKKSVIKNEKVNGGKKLLN
SNKSGAAFSQGKSLTLPQTCNREKIYTCSECGKAFGKQSILNRHWRIHTGEKPYECRECGKTFSHGSSLT
RHLISHSGEKPYKCIECGKAFSHVSSLTNHQSTHTGEKPYECMNCGKSFSRVSHLIEHLRIHTQEKLYEC
RICGKAFIHRSSLIHHQKIHTGEKPYECRECGKAFCCSSHLTRHQRIHTMEKQYECNKCLKVFSSLSFLV
QHQSIHTEEKPFECQKCRKSFNQLESLNMHLRNHIRLKPYECSICGKAFSHRSSLLQHHRIHTGEKPYEC
IKCGKTFSCSSNLTVHQRIHTGEKPYKCNECGKAFSKGSNLTAHQRVHNGEKPNSVVSVEKPLDYMNHYT
CEKSYRRETV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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