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Report for CCDS82435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82435.1 Public Homo sapiens 2 CEBPZOS 24 110 108 CCDS HistoryNCBI Gene:100505876Re-query CCDS DB by CCDS ID:82435.1Re-query CCDS DB by GeneID:100505876See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82435.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397064.6 ENSP00000380254.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397064.6Link to Ensembl Protein Viewer:ENSP00000380254.2Re-query CCDS DB by Nucleotide ID:ENST00000397064Re-query CCDS DB by Protein ID:ENSP00000380254
Original member Current member EBI ENST00000397226.2 ENSP00000380403.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397226.2Link to Ensembl Protein Viewer:ENSP00000380403.2Re-query CCDS DB by Nucleotide ID:ENST00000397226Re-query CCDS DB by Protein ID:ENSP00000380403
Original member Current member EBI ENST00000392061.6 ENSP00000383895.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392061.6Link to Ensembl Protein Viewer:ENSP00000383895.1Re-query CCDS DB by Nucleotide ID:ENST00000392061Re-query CCDS DB by Protein ID:ENSP00000383895
Original member Current member EBI ENST00000402297.6 ENSP00000384331.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000402297.6Link to Ensembl Protein Viewer:ENSP00000384331.1Re-query CCDS DB by Nucleotide ID:ENST00000402297Re-query CCDS DB by Protein ID:ENSP00000384331
Original member Current member EBI ENST00000406711.5 ENSP00000384813.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406711.5Link to Ensembl Protein Viewer:ENSP00000384813.1Re-query CCDS DB by Nucleotide ID:ENST00000406711Re-query CCDS DB by Protein ID:ENSP00000384813
Original member Current member NCBI NM_001322373.2 NP_001309302.1 Accepted alive Link to Nucleotide Sequence:NM_001322373.2Link to Protein Sequence:NP_001309302.1Re-query CCDS DB by Nucleotide ID:NM_001322373Re-query CCDS DB by Protein ID:NP_001309302Link to BLAST:NP_001309302.1
Original member Current member NCBI NM_001322374.2 NP_001309303.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001322374.2Link to Protein Sequence:NP_001309303.1Re-query CCDS DB by Nucleotide ID:NM_001322374Re-query CCDS DB by Protein ID:NP_001309303Link to BLAST:NP_001309303.1
Original member Current member NCBI NM_001322375.2 NP_001309304.1 Accepted alive Link to Nucleotide Sequence:NM_001322375.2Link to Protein Sequence:NP_001309304.1Re-query CCDS DB by Nucleotide ID:NM_001322375Re-query CCDS DB by Protein ID:NP_001309304Link to BLAST:NP_001309304.1
Original member Current member NCBI NM_001322376.2 NP_001309305.1 Accepted alive Link to Nucleotide Sequence:NM_001322376.2Link to Protein Sequence:NP_001309305.1Re-query CCDS DB by Nucleotide ID:NM_001322376Re-query CCDS DB by Protein ID:NP_001309305Link to BLAST:NP_001309305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001309302.1 80 A8MTT3 80 100% 0 0
NP_001309303.1 80 A8MTT3 80 100% 0 0
NP_001309304.1 80 A8MTT3 80 100% 0 0
NP_001309305.1 80 A8MTT3 80 100% 0 0

Chromosomal Locations for CCDS 82435.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 37199705 37199819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 37201048 37201092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 37201642 37201724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (243 nt):
ATGGCCCGTACTTTGGAACCACTAGCAAAGAAGATCTTTAAAGGAGTTTTGGTAGCCGAACTTGTAGGCG
TTTTTGGAGCATATTTTTTGTTTAGCAAGATGCACACAAGCCAAGATTTCAGGCAAACAATGAGCAAGAA
ATATCCCTTCATCTTGGAAGTTTATTACAAATCCACTGAGAAGTCTGGAATGTATGGAATCAGAGAGCTA
GATCAAAAAACATGGTTGAACAGCAAAAATTAG

Translation (80 aa):
MARTLEPLAKKIFKGVLVAELVGVFGAYFLFSKMHTSQDFRQTMSKKYPFILEVYYKSTEKSGMYGIREL
DQKTWLNSKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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