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Report for CCDS75216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75216.1 Public Homo sapiens 4 CFAP97 24 110 108 CCDS HistoryNCBI Gene:57587Re-query CCDS DB by CCDS ID:75216.1Re-query CCDS DB by GeneID:57587See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000514798.1 ENSP00000423312.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514798.1Link to Ensembl Protein Viewer:ENSP00000423312.1Re-query CCDS DB by Nucleotide ID:ENST00000514798Re-query CCDS DB by Protein ID:ENSP00000423312
Original member Current member NCBI NM_001292033.2 NP_001278962.1 Accepted alive Link to Nucleotide Sequence:NM_001292033.2Link to Protein Sequence:NP_001278962.1Re-query CCDS DB by Nucleotide ID:NM_001292033Re-query CCDS DB by Protein ID:NP_001278962Link to BLAST:NP_001278962.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278962.1 453 Q9P2B7-2 453 100% 0 0

Chromosomal Locations for CCDS 75216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 185170299 185170340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185175786 185176051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185190143 185191196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGGATCAGTTTGGAGATATATTAGAAGGTGAAGTGGACCATTCTTTCTTTGACAGTGACTTTGAAGAAG
GAAAGAAATGTGAAACTAACTCAGTTTTTGACAAGCAAAATGATGACCCAAAGGAAAGAATAGATAAAGA
TACAAAAAATGTAAATTCGAACACTGGAATGCAAACAACAGAAAATTATCTTACTGAGAAGGGAAATGAA
AGAAACGTGAAATTTCCCCCAGAACACCCCGTAGAGAATGATGTTACACAAACTGTAAGTTCTTTCTCAT
TGCCAGCCTCTTCAAGATCAAAAAAATTGTGTGATGTTACAACAGGACTTAAAATACACGTGTCCATTCC
AAATAGAATTCCCAAAATTGTAAAAGAAGGTGAAGATGATTACTACACAGATGGAGAGGAAAGCAGTGAT
GATGGGAAGAAATACCATGTGAAGTCCAAGTCCGCTAAACCATCTACTAACGTTAAAAAAAGCATAAGGA
AAAAGTATTGCAAAGTTAGCTCCTCTTCCTCCTCCTCTTTATCTTCCTCATCTTCAGGTTCAGGTACAGA
TTGTTTAGATGCAGGGTCTGATAGCCATCTATCTGATTCGTCTCCGTCATCTAAGTCATCTAAGAAACAT
GTATCTGGTATAACCCTCCTGTCACCAAAACACAAGTATAAATCAGGAATAAAATCGACAGAAACACAGC
CTTCAAGTACTACACCAAAATGTGGCCACTACCCTGAGGAGTCTGAAGATACTGTGACTGACGTAAGTCC
CTTATCAACTCCAGACATTAGCCCTCTTCAGTCTTTTGAACTGGGCATAGCAAATGATCAAAAAGTGAAA
ATTAAAAAGCAAGAAAATGTGAGCCAAGAAATATATGAAGATGTTGAGGATTTGAAAAATAATTCAAAAT
ATTTGAAAGCAGCCAAAAAAGGGAAAGAAAAACATGAGCCTGATGTCTCCTCAAAGTCGTCTTCAGTGTT
AGACTCCAGTTTAGACCACAGACATAAACAGAAAGTCTTACATGACACAATGGATCTGAATCATCTCTTG
AAAGCTTTTCTGCAATTAGATAAAAAAGGACCACAAAAACATCACTTTGATCAGCCTTCAGTAGCACCCG
GGAAAAACTACTCTTTCACAAGAGAAGAGGTGAGACAGATCGATCGGGAAAATCAGAGGCTTTTGAAAGA
ACTGTCAAGACAGGCGGAAAAGCCGGGAAGCAAAAGTACAATTCCTAGATCGGCTGATCATCCCCCAAAG
TTATATCACAGTGCTCTCAACAGACAGAAGGAACAACAAAGGATTGAGAGAGAAAACTTGACTATCTCGC
TCTGTCACCCAGGCTGGAGTGCAGTGACGTGA

Translation (453 aa):
MDQFGDILEGEVDHSFFDSDFEEGKKCETNSVFDKQNDDPKERIDKDTKNVNSNTGMQTTENYLTEKGNE
RNVKFPPEHPVENDVTQTVSSFSLPASSRSKKLCDVTTGLKIHVSIPNRIPKIVKEGEDDYYTDGEESSD
DGKKYHVKSKSAKPSTNVKKSIRKKYCKVSSSSSSSLSSSSSGSGTDCLDAGSDSHLSDSSPSSKSSKKH
VSGITLLSPKHKYKSGIKSTETQPSSTTPKCGHYPEESEDTVTDVSPLSTPDISPLQSFELGIANDQKVK
IKKQENVSQEIYEDVEDLKNNSKYLKAAKKGKEKHEPDVSSKSSSVLDSSLDHRHKQKVLHDTMDLNHLL
KAFLQLDKKGPQKHHFDQPSVAPGKNYSFTREEVRQIDRENQRLLKELSRQAEKPGSKSTIPRSADHPPK
LYHSALNRQKEQQRIERENLTISLCHPGWSAVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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