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Report for CCDS54491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54491.1 Public Homo sapiens 21 DIP2A 24 110 108 CCDS HistoryNCBI Gene:23181Re-query CCDS DB by CCDS ID:54491.1Re-query CCDS DB by GeneID:23181See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54491.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000466639.5 ENSP00000430249.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000466639.5Link to Ensembl Protein Viewer:ENSP00000430249.1Re-query CCDS DB by Nucleotide ID:ENST00000466639Re-query CCDS DB by Protein ID:ENSP00000430249
Original member Current member NCBI NM_001146115.2 NP_001139587.1 Accepted alive Link to Nucleotide Sequence:NM_001146115.2Link to Protein Sequence:NP_001139587.1Re-query CCDS DB by Nucleotide ID:NM_001146115Re-query CCDS DB by Protein ID:NP_001139587Link to BLAST:NP_001139587.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139587.1 798 Q14689-3 798 100% 0 0

Chromosomal Locations for CCDS 54491.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 46459132 46459222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46484757 46484828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46490600 46490719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46496988 46497107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46498582 46498833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46509257 46509376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46511417 46511614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46529092 46529183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46532127 46532237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46533524 46533647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46534004 46534113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46534585 46534687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46537224 46537288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46537446 46537539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46538483 46538602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46539877 46539991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46541756 46541895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46545137 46545273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46545881 46545961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46546915 46547046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2397 nt):
ATGGCTGACCGCGGGTGCCCGCTGGAGGCGGCGCCGCTGCCTGCCGAGGTGCGGGAGAGCCTGGCTGAGC
TGGAGCTGGAGCTGTCGGAAGGTGACATCACTCAAAAAGGATATGAAAAGAAAAGGGCAAAGCTGCTTGC
ACGTTATATACCGCTTATTCAAGGAATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCTGGGCCCTCA
CAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGT
CAGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTC
GAAGAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAACCTACACCCCTCCAGACACGTCGTCTGCCTCA
GAAGATGAGGGCTCTTTACGGCGACCCGGGCGACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGTCG
AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCCACCTCATCTCACCC
GGGAGGGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCA
GGCCTCGAGGCCCACACCCACATAGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAATCCAGCAGCTTC
TGAACACCCTGAAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTTGTGGATGATTTTGAGGAATTGTT
GGAAGTTCAGCAACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGGAG
CCTCTCACTGCAGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAACACAGC
CCAAATCCCCCTGTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCTACACTCTCACCTATGGTAAACT
TTGGAGTCGGAGTTTAAAACTAGCTTATACTCTACTTAATAAACTGACAAGTAAGAATGAACCTCTACTT
AAACCTGGAGACAGAGTGGCGCTCGTGTTTCCGAATAGTGACCCTGTGATGTTCATGGTTGCATTTTATG
GGTGTCTCCTGGCAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCAGCCA
GCAGGTTGGGTTTCTGCTGGGCAGCTGTGGAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGAAAGGC
CTCCCCAAGGCACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCTCTCCTGGCTAGTGATTG
ATGGGAAGCATCTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACACAGGGACTGGGACTGC
CTACATTGAGTATAAAACCAGCAAAGAAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCATCCCTGCTG
GCACAGTGCCGGGCTCTGACCCAGGCGTGCGGGTACTCAGAAGCTGAAACATTAACAAACGTGCTGGATT
TCAAAAGGGATGCTGGTCTGTGGCATGGCGTGTTAACAAGCGTCATGAACAGGATGCACGTGGTCAGCGT
CCCCTACGCGCTGATGAAGGCGAACCCACTCTCCTGGATCCAGAAAGTGTGCTTCTATAAAGCTCGGGCC
GCGCTGGTGAAGTCGCGAGACATGCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGACGTCAGCCTCA
GCTCACTGCGCATGCTGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTCCTCCTGTGACGCCTTCCT
CAACGTCTTCCAGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCTTGTGCAAGTTCTCCTGAGGCGCTG
ACTGTCGCCATCCGCAGGCCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAACG
GTCTAAGTTATGGTGTTATCAGAGTGGATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAGGACGTTGG
TCAGGTGATGCCTGGAGCTAATGTATGTGTTGTGAAGTTAGAAGGTACCCCTTATCTTTGTAAAACTGAT
GAAGTGGGAGAAATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTACTATGGATTGCTTGGAATCACGA
AGAATGTGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGAC
AGGCCTGCTGGGCTTCATCGGGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGATGGTC
ACTGGAGTTCGCAGACACAATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCCATGAAGTTTG
TCTACAGAGGCAGGTGA

Translation (798 aa):
MADRGCPLEAAPLPAEVRESLAELELELSEGDITQKGYEKKRAKLLARYIPLIQGIDPSLQAENRIPGPS
QTTAAAPKQQKSRPTASRDERFRSDVHTEAVQAALAKYKERKMPMPSKRRSVLVHSSVETYTPPDTSSAS
EDEGSLRRPGRLTSTPLQSHSSVEPWLDRVIQGSSTSSSASSTSSHPGGRPTTAPSAAATPGAAATTALA
GLEAHTHIGVPVNSRVSSKIQQLLNTLKRPKRPPLKEFFVDDFEELLEVQQPDPNQPKPEGSETSVLRGE
PLTAGVPRPPSLLATLQRWGTTQPKSPCLTALDTTGKAVYTLTYGKLWSRSLKLAYTLLNKLTSKNEPLL
KPGDRVALVFPNSDPVMFMVAFYGCLLAELVPVPIEVPLTRKDAGSQQVGFLLGSCGVFLALTTDACQKG
LPKAQTGEVAAFKGWPPLSWLVIDGKHLAKPPKDWHPLAQDTGTGTAYIEYKTSKEGSTVGVTVSHASLL
AQCRALTQACGYSEAETLTNVLDFKRDAGLWHGVLTSVMNRMHVVSVPYALMKANPLSWIQKVCFYKARA
ALVKSRDMHWSLLAQRGQRDVSLSSLRMLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSPEAL
TVAIRRPPDLGGPPPRKAVLSMNGLSYGVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTD
EVGEICVSSSATGTAYYGLLGITKNVFEAVPVTTGGAPIFDRPFTRTGLLGFIGPDNLVFIVGKLDGLMV
TGVRRHNADDVVATALAVEPMKFVYRGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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