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Report for CCDS37221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37221.1 Public Mus musculus 15 Krt1 23 108 98 CCDS HistoryNCBI Gene:16678Re-query CCDS DB by CCDS ID:37221.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37221.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023790.4 ENSMUSP00000023790.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023790.4Link to Ensembl Protein Viewer:ENSMUSP00000023790.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000023790Re-query CCDS DB by Protein ID:ENSMUSP00000023790
Original member Current member NCBI NM_008473.2 NP_032499.2 Accepted alive Link to Nucleotide Sequence:NM_008473.2Link to Protein Sequence:NP_032499.2Re-query CCDS DB by Nucleotide ID:NM_008473Re-query CCDS DB by Protein ID:NP_032499Link to BLAST:NP_032499.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032499.2 637 P04104 637 100% 0 0

Chromosomal Locations for CCDS 37221.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101845900 101846279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101846368 101846402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101846824 101847044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101847506 101847631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101847757 101847921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101848100 101848195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101848570 101848630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101848944 101849158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101850113 101850727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1914 nt):
ATGAGTCTACAGTGTAGCTCCAGGTCCCTGTGCCGCGGTGGCGGTGGCAGCAGGAACTTCAGCTCAGGCT
CTGCTGGCCTAGTCAGCTTCCAGCGCAGATCCACCAGCAGCTCTATGCGCCGCAGCGGTGGAGGTGGTGG
TGGGAGATTTTCAGGAGGAGGCTTCTGTGGGAGTTCTGGTAGTGGCTTTGGAAGTAAGAGTCTTATGAAC
CTTGGAGGCGGTAGGAGCATCTCCAAGAGTGTGGCTGGAGGTGGTGGCAGCTTCTGTGGTGGCTTTGGGG
GTGGCAGCTACGGCGGTGGTGGCTTTGGGGGTGGCAGCTACGGCGGTGGTGGCTTTGGGGGTGGCAGCTT
CGGCGGTGGTGGCTTTGGAGGGAGTGGTTTTGGCGGAGGTCTTGGTGGTGGTGGTGGTTTTGGTAGTGGA
GGTGGTTTTGGTGGTGGTAGATTTGGTAGTATGGGGCCTGTCTGTCCCCCTGGTGGCATCCAGGAAGTGA
CCATCAACCAAAGCCTTCTGCAACCCCTCAACGTTGAGGTTGACCCTCAGATTCAAAAAGTGAAGTCTCA
GGAGAGAGAGCAGATCAAGTCACTCAATGACAAGTTTGCCTCCTTCATCGACAAGGTGCGCTTCCTAGAG
CAACAAAACCAGGTGCTACAAACCAAATGGGAGCTGCTGCAGCAGGTAGACACCACAACCCGGACCCAAA
ACTTAGACCCTTTTTTTGAGAACTATATCAGCATCCTCAGAAGGAAGGTGGACTCGCTGAAGAGTGACCA
GTCACGGATGGATTCTGAGCTGAAGAACATGCAAGACCTGGTGGAAGAGTACAGGACCAAGTACGAGGAT
GAAATCAACAAGAGGACCAACGCAGAGAATGAGTTCGTGACCATCAAGAAGGATGTGGATTCAGCTTACA
TGACCAAAGTTGAGCTTCAGGCCAAGGCAGATGCCCTCCAGCAAGACATTGACTTCTTCTCTGCACTCTA
CCAAATGGAAATGTCTCAGATGCAAACTCAAATCAGCGAAACCAATGTTGTCCTGTCCATGGACAACAAC
CGCAGTTTGGATCTGGATGGCATCATCTCGGAAGTCAAGGCCCAGTATGATAGCATTTGCCAGAGGAGCA
AGGCTGAAGCTGAGACCTTTTACCAGAGCAAGTACGAAGAGCTGCAGATCACTGCTGGCAAACATGGAGA
CAGTGTGAGAAATACCAAGATGGAGATTTCTGAGCTGAATCGAATGATCCAGAGACTTCGATCTGAAATT
GATGGTTGCAAGAAGCAGATCTCCCAAATACAGCAGAACATCAATGATGCTGAGCAGCGTGGTGAGAAAG
CACTCAAAGATGCCCAGAACAAGCTGAATGAGATAGAGGATGCATTGTCGCAATGCAAGGAGGATCTTGC
CAGATTGCTGCGTGACTTCCAGGAGCTGATGAACACTAAGCTGGCCCTGGACATGGAGATTGCCACATAC
AAGAAACTTCTGGAAGGAGAGGAGATCAGGATGTCTGGAGAGTGCACTCCCAACGTGAGCGTGTCGGTGA
GCACCAGCCACACCAGCATGAGCGGAAGCAGTAGCCGAGGCGGCGGCAGCGGCGGCGGCAGATACGGAGG
CGGTGGCAGTTATGGCGGCGGCTCTGGAGGCGGCAGCTACGGCGGCAGTTCTGGAGGCGGAGGCAGTGGT
GGCAGCTACGGCGGCGGCTCCGGAGGCGGCAGCTACGGCGGCGGCTCCGGAGGCGGCAGCAGTGGAAGCC
ACAGAGGTGGCTCTGGAGGGGGCGGTGGCAGCTCCGGAGGCAGCTACGGTGGCTCCTCTGGCGGAGGCCG
GGGAGGATCCAGCTCAGGTGGCGGTGGCGTTAAGTCCTCTGGCAGTTCTACCGTGAAGTTTGTTTCCACC
AGTTACTCCCGAGGGACCAAATAA

Translation (637 aa):
MSLQCSSRSLCRGGGGSRNFSSGSAGLVSFQRRSTSSSMRRSGGGGGGRFSGGGFCGSSGSGFGSKSLMN
LGGGRSISKSVAGGGGSFCGGFGGGSYGGGGFGGGSYGGGGFGGGSFGGGGFGGSGFGGGLGGGGGFGSG
GGFGGGRFGSMGPVCPPGGIQEVTINQSLLQPLNVEVDPQIQKVKSQEREQIKSLNDKFASFIDKVRFLE
QQNQVLQTKWELLQQVDTTTRTQNLDPFFENYISILRRKVDSLKSDQSRMDSELKNMQDLVEEYRTKYED
EINKRTNAENEFVTIKKDVDSAYMTKVELQAKADALQQDIDFFSALYQMEMSQMQTQISETNVVLSMDNN
RSLDLDGIISEVKAQYDSICQRSKAEAETFYQSKYEELQITAGKHGDSVRNTKMEISELNRMIQRLRSEI
DGCKKQISQIQQNINDAEQRGEKALKDAQNKLNEIEDALSQCKEDLARLLRDFQELMNTKLALDMEIATY
KKLLEGEEIRMSGECTPNVSVSVSTSHTSMSGSSSRGGGSGGGRYGGGGSYGGGSGGGSYGGSSGGGGSG
GSYGGGSGGGSYGGGSGGGSSGSHRGGSGGGGGSSGGSYGGSSGGGRGGSSSGGGGVKSSGSSTVKFVST
SYSRGTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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