NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS13803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13803.1 Public Homo sapiens 22 RSPH14 24 110 108 CCDS HistoryNCBI Gene:27156Re-query CCDS DB by CCDS ID:13803.1Re-query CCDS DB by GeneID:27156See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216036.9 ENSP00000216036.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216036.9Link to Ensembl Protein Viewer:ENSP00000216036.4Re-query CCDS DB by Nucleotide ID:ENST00000216036Re-query CCDS DB by Protein ID:ENSP00000216036
Original member Current member NCBI NM_014433.3 NP_055248.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014433.3Link to Protein Sequence:NP_055248.1Re-query CCDS DB by Nucleotide ID:NM_014433Re-query CCDS DB by Protein ID:NP_055248Link to BLAST:NP_055248.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055248.1 348 Q9UHP6 348 100% 0 0

Chromosomal Locations for CCDS 13803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 23059462 23059718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23061809 23061945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23063902 23064133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23134026 23134144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23138840 23138942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 23140222 23140420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGGCCCATTCCCAGAACTCCTTGGAGCTTCCCATTAACATCAATGCCACCCAGATTACCACTGCCTATG
GCCATCGGGCCCTGCCCAAGCTGAAGGAGGAGCTGCAGTCAGAGGACCTCCAGACGAGGCAGAAAGCCCT
CATGGCCTTGTGTGACCTCATGCATGACCCCGAGTGTATCTACAAGGCCATGAACATAGGCTGTATGGAG
AACCTGAAAGCTTTGCTGAAGGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCA
CGGCAAGCCATAGCGTGGGCAGATACGCCTTTCTAGAGCACGACATCGTCCTTGCCCTGTCCTTCCTGCT
GAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGA
GGGGCCCAAGAGATCATCAGCAAAGGTCTGATTTCCTCACTGGTATGGAAGCTGCAGGTGGAGGTGGAGG
AGGAGGAGTTCCAGGAGTTCATCCTGGACACACTGGTCCTCTGCCTGCAGGAGGATGCCACCGAGGCCCT
GGGCAGCAATGTGGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCC
GCCCGTGCGCTCCTTAATGTCAGCATATCTCGAGAGGGCAAGAAACAGGTGTGTCATTTTGACGTCATCC
CCATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGAAGTCTAACGCTGCCGGTGCCCTGATGTT
CGCCACAGTGATCACTGAAGGGAAGTATGCGGCCCTGGAGGCACAAGCCATCGGCCTGCTCCTGGAGCTG
CTGCACTCCCCCATGACCATAGCGCGCCTGAATGCCACCAAGGCCCTTACCATGCTGGCAGAGGCCCCCG
AGGGCCGCAAGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCATGGAGGTGGAGACTTACGAAAAGCC
TCAAGTGGCCGAAGCCTTACAGCGGGCAGCCCGGATCGCCATCAGTGTCATCGAGTTCAAACCCTGA

Translation (348 aa):
MAHSQNSLELPININATQITTAYGHRALPKLKEELQSEDLQTRQKALMALCDLMHDPECIYKAMNIGCME
NLKALLKDSNSMVRIKTTEVLHITASHSVGRYAFLEHDIVLALSFLLNDPSPVCRGNLYKAYMQLVQVPR
GAQEIISKGLISSLVWKLQVEVEEEEFQEFILDTLVLCLQEDATEALGSNVVLVLKQKLLSANQNIRSKA
ARALLNVSISREGKKQVCHFDVIPILVHLLKDPVEHVKSNAAGALMFATVITEGKYAALEAQAIGLLLEL
LHSPMTIARLNATKALTMLAEAPEGRKALQTHVPTFRAMEVETYEKPQVAEALQRAARIAISVIEFKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH