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Report for CCDS31874.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31874.1 Public Homo sapiens 12 EEA1 24 110 108 CCDS HistoryNCBI Gene:8411Re-query CCDS DB by CCDS ID:31874.1Re-query CCDS DB by GeneID:8411See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31874.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322349.13 ENSP00000317955.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322349.13Link to Ensembl Protein Viewer:ENSP00000317955.8Re-query CCDS DB by Nucleotide ID:ENST00000322349Re-query CCDS DB by Protein ID:ENSP00000317955
Original member Current member NCBI NM_003566.4 NP_003557.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003566.4Link to Protein Sequence:NP_003557.3Re-query CCDS DB by Nucleotide ID:NM_003566Re-query CCDS DB by Protein ID:NP_003557Link to BLAST:NP_003557.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003557.3 1411 Q15075 1411 100% 0 0

Chromosomal Locations for CCDS 31874.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 92776011 92776133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92776844 92776942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92777543 92777663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92777941 92778179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92779115 92779300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92780280 92780411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92781950 92782135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92787867 92788049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92798892 92799086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92801600 92801701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92802404 92802734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92809017 92809156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92811279 92811434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92812980 92813093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92816200 92816400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92819308 92819511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92826166 92826285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92827912 92828061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92832512 92832850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92842465 92842581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92851111 92851266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92852175 92852296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92852912 92853025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92853915 92853954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92857275 92857340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92857431 92857485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92864860 92864987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92891629 92891721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 92929043 92929066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4236 nt):
ATGTTAAGGAGGATTTTACAGAGGACTCCTGGGAGAGTTGGCTCTCAAGGTTCTGATTTAGATTCATCAG
CAACTCCTATAAACACAGTGGACGTCAATAATGAAAGCTCTTCAGAGGGTTTCATATGTCCCCAGTGTAT
GAAATCTCTTGGATCTGCTGATGAACTTTTCAAACATTATGAAGCTGTTCATGATGCTGGTAATGACTCA
GGTCATGGAGGAGAGTCTAATCTTGCTTTGAAGCGAGATGATGTAACACTGCTCAGACAAGAGGTCCAAG
ACCTACAGGCTTCACTTAAGGAAGAAAAATGGTACTCGGAAGAATTAAAGAAGGAATTAGAAAAATATCA
AGGGCTGCAGCAGCAAGAGGCCAAACCTGATGGGTTGGTGACTGATTCATCAGCAGAACTACAGTCTTTG
GAACAGCAATTAGAAGAAGCCCAAACAGAAAATTTTAATATTAAGCAAATGAAAGACTTATTTGAACAGA
AAGCAGCCCAACTTGCTACTGAAATTGCAGATATAAAGTCAAAGTATGATGAAGAAAGGAGTCTTCGAGA
AGCTGCTGAACAAAAAGTGACACGTCTGACAGAAGAATTAAACAAAGAGGCAACTGTAATTCAAGATCTG
AAGACGGAACTGCTTCAGAGACCTGGTATAGAAGATGTTGCCGTGCTAAAGAAAGAACTGGTCCAAGTTC
AAACACTAATGGATAACATGACCTTGGAACGTGAGCGAGAATCTGAAAAACTCAAAGATGAATGCAAAAA
ATTGCAGTCACAATATGCTAGCTCAGAGGCCACAATAAGCCAGCTAAGGAGTGAACTTGCCAAAGGCCCC
CAGGAAGTTGCTGTATATGTACAGGAACTACAAAAACTGAAAAGTTCAGTTAATGAATTAACACAAAAAA
ATCAGACCTTGACAGAAAACTTGCTGAAAAAAGAACAAGACTATACTAAGTTAGAGGAGAAACATAATGA
AGAATCTGTGAGTAAAAAGAATATTCAGGCAACCCTTCATCAAAAAGACCTAGATTGTCAACAGCTTCAG
TCAAGATTGTCTGCATCTGAAACCTCACTGCATAGAATACATGTAGAACTAAGTGAAAAAGGAGAAGCTA
CTCAAAAGCTCAAAGAAGAATTATCTGAGGTAGAGACCAAGTACCAGCATCTAAAGGCGGAGTTTAAGCA
GCTACAACAACAGAGAGAAGAAAAGGAGCAGCATGGGTTACAACTCCAAAGTGAAATTAATCAATTACAT
AGCAAACTTCTGGAGACAGAGCGCCAACTAGGGGAAGCTCATGGTAGGCTGAAGGAACAGAGACAGCTTT
CAAGTGAAAAGTTGATGGATAAAGAACAACAAGTGGCTGATTTACAACTCAAACTTTCTCGGTTAGAAGA
GCAGTTGAAGGAAAAAGTTACAAATTCTACAGAATTGCAGCATCAATTAGATAAAACAAAGCAACAGCAT
CAAGAACAACAGGCTCTTCAGCAAAGCACCACGGCAAAACTTCGAGAAGCTCAGAATGATTTGGAACAAG
TTCTACGTCAAATTGGCGATAAGGACCAAAAGATCCAGAACCTTGAAGCTTTATTACAGAAGAGTAAAGA
AAATATTTCATTACTAGAAAAAGAAAGAGAAGATCTTTATGCAAAAATTCAGGCTGGTGAAGGAGAGACT
GCTGTTCTTAACCAGTTACAAGAAAAAAACCATACACTACAGGAGCAAGTAACTCAACTAACAGAGAAGC
TGAAGAATCAGTCAGAAAGTCATAAACAAGCCCAGGAGAATTTGCATGACCAGGTACAAGAGCAGAAGGC
ACATCTTAGAGCTGCACAAGACCGTGTCCTTTCCCTAGAAACTAGTGTCAATGAATTAAATAGTCAATTA
AATGAAAGCAAGGAGAAGGTCTCCCAGCTTGACATACAGATTAAAGCCAAAACCGAACTATTACTATCAG
CAGAAGCAGCAAAAACTGCTCAAAGAGCTGATCTTCAGAATCATTTGGACACAGCTCAAAATGCATTACA
AGATAAACAGCAGGAGTTAAATAAGATTACTACTCAGTTGGATCAGGTCACTGCAAAGTTACAAGACAAG
CAAGAACATTGCAGTCAGCTGGAAAGTCATCTTAAAGAATATAAAGAGAAATACCTCTCTTTAGAACAGA
AAACCGAAGAGCTAGAAGGTCAAATTAAGAAACTAGAAGCTGATAGTCTTGAAGTTAAAGCAAGCAAGGA
GCAGGCTTTGCAAGATCTACAACAGCAAAGACAGCTGAACACAGATTTAGAGCTCAGAGCCACAGAATTG
AGTAAACAACTTGAAATGGAGAAGGAAATAGTATCCAGTACAAGATTGGATCTACAGAAAAAATCTGAAG
CCCTTGAAAGTATCAAGCAAAAGCTTACCAAGCAAGAGGAAGAAAAAAAAATCCTGAAACAAGATTTTGA
AACTTTAAGTCAAGAAACAAAGATTCAGCATGAGGAATTGAATAACAGAATTCAAACAACAGTAACAGAA
CTACAAAAAGTGAAAATGGAGAAAGAAGCTTTAATGACAGAGCTTTCTACAGTAAAGGACAAACTATCAA
AAGTTTCTGATTCTTTGAAAAACTCTAAAAGTGAATTTGAAAAGGAGAATCAGAAAGGAAAAGCCGCTAT
ATTAGACTTGGAAAAAACTTGCAAAGAATTAAAGCATCAACTTCAAGTGCAGATGGAAAACACACTTAAG
GAACAGAAGGAACTGAAAAAGTCACTTGAAAAAGAGAAGGAGGCTTCTCATCAGTTGAAATTGGAACTCA
ATTCAATGCAGGAACAACTTATACAGGCCCAGAATACTTTAAAACAAAATGAAAAAGAAGAGCAACAACT
TCAGGGGAACATAAATGAGCTAAAGCAATCAAGTGAACAGAAGAAAAAACAAATTGAAGCACTCCAAGGA
GAGCTTAAAATTGCTGTTTTACAGAAGACAGAGCTTGAGAATAAACTACAGCAGCAGTTAACACAGGCAG
CCCAGGAACTTGCAGCAGAGAAAGAGAAAATATCAGTATTACAAAACAACTATGAAAAAAGTCAGGAAAC
TTTCAAACAGCTTCAATCTGATTTCTATGGGAGGGAATCTGAACTTCTAGCCACCAGGCAAGATCTTAAG
TCTGTAGAAGAGAAGCTTTCTCTAGCACAGGAGGACTTGATTTCAAACAGAAATCAAATTGGAAATCAAA
ATAAATTGATTCAAGAACTGAAGACTGCCAAGGCTACATTGGAGCAGGATTCAGCAAAGAAAGAACAGCA
ATTGCAGGAGCGATGTAAAGCACTACAAGACATTCAGAAAGAAAAGTCACTGAAAGAAAAAGAACTGGTA
AATGAGAAGTCTAAATTGGCAGAGATAGAAGAAATTAAATGTAGACAAGAAAAAGAAATCACTAAACTAA
ACGAAGAACTCAAGTCCCACAAACTAGAAAGCATAAAGGAGATAACAAATCTTAAAGATGCTAAACAGCT
TCTAATTCAGCAGAAATTAGAACTTCAAGGAAAAGCGGACTCCCTGAAGGCAGCTGTTGAACAGGAGAAG
AGAAATCAGCAGATACTAAAAGACCAGGTGAAAAAGGAAGAAGAGGAGCTGAAGAAAGAATTTATTGAGA
AAGAAGCTAAGTTGCATTCCGAAATAAAAGAAAAGGAAGTAGGAATGAAGAAGCATGAAGAAAATGAGGC
TAAACTTACCATGCAGATTACAGCATTAAATGAAAACTTAGGCACTGTGAAGAAGGAGTGGCAATCTAGT
CAACGGAGAGTTAGTGAGCTTGAGAAACAAACGGATGACTTACGGGGTGAAATTGCAGTATTAGAAGCAA
CGGTTCAGAATAATCAAGATGAAAGGAGAGCACTACTGGAAAGATGTCTTAAAGGAGAAGGTGAAATAGA
AAAGCTTCAAACCAAAGTATTAGAATTGCAAAGAAAGCTGGATAATACAACTGCAGCAGTGCAGGAGCTG
GGCAGAGAAAACCAATCACTTCAGATCAAACATACACAAGCGTTGAATAGAAAGTGGGCCGAAGACAATG
AAGTACAAAACTGTATGGCCTGTGGGAAAGGCTTTTCAGTAACAGTGAGACGGCATCACTGCCGACAGTG
TGGAAATATCTTCTGTGCTGAATGTTCAGCCAAAAATGCCTTAACTCCTTCCTCCAAGAAGCCTGTTCGT
GTCTGTGATGCATGTTTCAATGACTTGCAAGGATAA

Translation (1411 aa):
MLRRILQRTPGRVGSQGSDLDSSATPINTVDVNNESSSEGFICPQCMKSLGSADELFKHYEAVHDAGNDS
GHGGESNLALKRDDVTLLRQEVQDLQASLKEEKWYSEELKKELEKYQGLQQQEAKPDGLVTDSSAELQSL
EQQLEEAQTENFNIKQMKDLFEQKAAQLATEIADIKSKYDEERSLREAAEQKVTRLTEELNKEATVIQDL
KTELLQRPGIEDVAVLKKELVQVQTLMDNMTLERERESEKLKDECKKLQSQYASSEATISQLRSELAKGP
QEVAVYVQELQKLKSSVNELTQKNQTLTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQLQ
SRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLH
SKLLETERQLGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQH
QEQQALQQSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGET
AVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQL
NESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQELNKITTQLDQVTAKLQDK
QEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLNTDLELRATEL
SKQLEMEKEIVSSTRLDLQKKSEALESIKQKLTKQEEEKKILKQDFETLSQETKIQHEELNNRIQTTVTE
LQKVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQMENTLK
EQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEALQG
ELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNNYEKSQETFKQLQSDFYGRESELLATRQDLK
SVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQDIQKEKSLKEKELV
NEKSKLAEIEEIKCRQEKEITKLNEELKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKAAVEQEK
RNQQILKDQVKKEEEELKKEFIEKEAKLHSEIKEKEVGMKKHEENEAKLTMQITALNENLGTVKKEWQSS
QRRVSELEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQEL
GRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVR
VCDACFNDLQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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