NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9983.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9983.3 Public Homo sapiens 14 COA8 24 110 108 CCDS HistoryNCBI Gene:84334Re-query CCDS DB by CCDS ID:9983.3Re-query CCDS DB by GeneID:84334See the combined annotation on chromosome 14 in Sequence Viewer

Public Note for CCDS 9983.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 9983.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409074.8 ENSP00000386485.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409074.8Link to Ensembl Protein Viewer:ENSP00000386485.3Re-query CCDS DB by Nucleotide ID:ENST00000409074Re-query CCDS DB by Protein ID:ENSP00000386485
Original member Current member NCBI NM_001370595.2 NP_001357524.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370595.2Link to Protein Sequence:NP_001357524.1Re-query CCDS DB by Nucleotide ID:NM_001370595Re-query CCDS DB by Protein ID:NP_001357524Link to BLAST:NP_001357524.1

Chromosomal Locations for CCDS 9983.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 103563002 103563124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103571623 103571820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103574107 103574170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103587274 103587364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103590181 103590286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGTGGTCTTGCGGGCGGGGAAGAAGACCTTTCTCCCCCCTCTCTGCCGCGCCTTCGCCTGCCGCGGCT
GTCAACTCGCTCCGGAGCGCGGCGCCGAGCGCAGGGATACGGCGCCCAGCGGGGTCTCAAGATTCTGCCC
TCCAAGAAAGTCTTGCCATGATTGGATAGGACCCCCAGATAAATATTCAAACCTTCGACCTGTTCACTTT
TACATACCTGAAAATGAATCTCCATTGGAACAAAAGCTTAGAAAATTAAGACAAGAAACACAAGAATGGA
ATCAACAGTTCTGGGCAAACCAGAATTTGACTTTTAGTAAGGAAAAAGAAGAATTTATTCACTCAAGACT
AAAAACTAAAGGCCTGGGCCTGAGAACTGAATCAGGTCAGAAAGCAACATTGAATGCAGAAGAAATGGCG
GACTTCTACAAGGAATTTTTAAGTAAAAATTTTCAGAAGCACATGTATTATAACAGAGATTGGTACAAGC
GCAATTTTGCCATCACCTTCTTCATGGGAAAAGTGGCCCTGGAAAGGATTTGGAACAAGCTTAAACAGAA
ACAAAAGAAGAGGAGCAACTAG

Translation (193 aa):
MVVLRAGKKTFLPPLCRAFACRGCQLAPERGAERRDTAPSGVSRFCPPRKSCHDWIGPPDKYSNLRPVHF
YIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTESGQKATLNAEEMA
DFYKEFLSKNFQKHMYYNRDWYKRNFAITFFMGKVALERIWNKLKQKQKKRSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH