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Report for CCDS49207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49207.1 Public Mus musculus 13 Hecw1 23 108 98 CCDS HistoryNCBI Gene:94253Re-query CCDS DB by CCDS ID:49207.1Re-query CCDS DB by GeneID:94253See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49207.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110516.2 ENSMUSP00000106145.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110516.2Link to Ensembl Protein Viewer:ENSMUSP00000106145.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000110516Re-query CCDS DB by Protein ID:ENSMUSP00000106145
Original member Current member NCBI NM_001081348.3 NP_001074817.3 Accepted alive Link to Nucleotide Sequence:NM_001081348.3Link to Protein Sequence:NP_001074817.3Re-query CCDS DB by Nucleotide ID:NM_001081348Re-query CCDS DB by Protein ID:NP_001074817Link to BLAST:NP_001074817.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074817.3 1604 Q8K4P8-1 1604 100% 0 0

Chromosomal Locations for CCDS 49207.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 14230649 14230760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14234299 14234497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14236891 14237005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14245729 14245875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14247559 14247688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14248344 14248442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14264065 14264217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14265113 14265226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14265958 14266078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14270959 14271068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14272007 14272090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14278278 14278374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14280416 14280521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14285548 14285682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14297270 14297455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14300326 14300447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14305976 14306118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14306783 14306933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14311689 14311790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14316017 14317360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14318874 14318974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14322478 14322620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14340745 14340914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14346020 14346095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14357133 14357227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14371955 14372062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14377658 14377982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 14434434 14434460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4815 nt):
ATGCTGCTGCACCTGTGTAGTGTGAAGAATCTGTACCAGAACAGGTTTTTAGGCCTGGCTGCCATGGCGT
CTCCATCTAGAAACTCCCAGAGCCGACGCCGGTGCAAAGAACCCCTCCGGTACAGCTATAACCCAGACCA
ATTCCACAACATAGACATCAGAAATGGTGCCCATGATGCTATCACCATCCCTCGCTCCACCAGTGACACT
GACCTGGTCACTTCAGACAGCCGCTCTACACTCATGGTCAGCAGTTCCTACTATTCGATAGGGCACTCCC
AGGATTTGGTGATCCACTGGGACATCAAGGAAGAAGTGGATGCTGGAGACTGGATTGGCATGTACCTTAT
TGGTGAAGTCTCATCTGAAAACTTTCTGGATTATAAGAACCGTGGAGTCAATGGTTCTCACAGAGGCCAG
ATCATCTGGAAGATTGATGCCAGCTCTTACTTTGTGGAATCTGAAACTAAGATCTGCTTCAAATACTACC
ACGGAGTAAGTGGGGCCCTGCGAGCTACAACCCCCAGTGTCACTGTCAAGAACTCAGCAGCCCCTATTTT
TAAAGGTATTGGCTCTGAAGAGACTGCACAAAGTCAAGGAAGCCGGAGGCTGATCAGCTTCTCCCTCTCA
GATTTCCAGGCCATGGGATTGAAGAAAGGGATGTTTTTCAACCCCGACCCTTATCTGAAGATTTCCATTC
AACCTGGGAAACATAGCATCTTCCCAGCCCTCCCTCATCATGGACAGGAAAGGAGATCCACGATCATAGG
CAACACTGTAAACCCCATCTGGCAGGCAGAGCATTTCAGTTTCGTGTCTCTGCCAACCGATGTGCTGGAA
ATTGAAGTGAAGGACAAGTTTGCCAAGAGTCGTCCCATCATCAAGCGTTTCTTGGGAAAGCTGTCAATGC
CTGTTCAGAGGCTGCTGGAGAGACACGCCATAGGGGATAGGGTGGTCAGCTACACACTTGGCCGCCGGCT
TCCAACTGACCATGTGAGTGGGCAGCTGCAATTCCGATTTGAGATCACATCCTCCATCCATGCAGATGAT
GAAGAGATCTCTCTGAGTGCTGAGCCTGAGTCGTCAGCAGAAACGCAGGACAGCATCATGAATAGTATGG
TGGGAAACAGCAATGGAGAGCCTTCTGGTGATGCTACAGAATTCTGCAAGGATGCGAAGCCAGAGTCACC
AAGTGAAGGGAATGGAGTAAACAGCTCAGAAAACCAAAACCAGGAGCATGCCGGGCCAGTTGAGGAAGCG
GCAGGAGCTATGGAGGCCAGAGATGGTAGCAATGTCTCTGAAGCACCCGAAGAGCCCGGAGAGCTTCAGG
ACCCAGAGCAACATGACACCCAGCCCACCCTGAGTGCAGAAGAAGTGGCCGAGGGACTTCCCCTGGATGA
GGATTCGCCATCCTCGCTGTTGCCAGAAGAGAATACAGCTCTAGGCAGCAAGGTAGAAGAGGAAACAGTA
CCAGAAAATGGAGCCAGAGAGGAAGAAATGCAGAAGGGGAAAGATGAAGAAGAGGAAGAAGAGGACGTTT
CTACCCTGGAGCAAGGAGAGCCTGGACTGGAGCTGAGGGTCTCCGTGAGAAAAAAAAGCAGACCATGTTC
CCTACCTGTATCAGAGCTTGAGACAGTGATTGCATCTGCCTGTGGAGATGCTGAGACCCCGAGAACCCAT
TATATCCGCATCCACACCCTGCTGCACAGCATGCCCTCGGCCCAGAGAGGAAGCACCACGGAGGAGGAAG
ATGGCTTGGAGGAGGAATCCACCCTCAAGGAGTCCTCTGAAAAGGATGGGCTCAGCGAGGTGGACACAAT
AGCTGCTGACCCACAGTCCATGGAAGATGGCGAGAGCGATGGGGCTACTCTGTGCATGGCACCCTCTGAC
TGCTCTGGGGGACATTTCTCCAGTTTATCCAAAGGCATTGGTGCTGGCCAAGATGGCGAAGCTCACCCCA
GCACTGGGAGTGAGAGTGACTCCAGCCCCCAGCAGGGAGCAGACCACAGTTGCGAGGGCTGTGATGCCTC
ATGCTGCAGCCCGTCTTGCTATAGCACATCTTGCTACAGCAGCTCTTGTTACAGCAGCTCCTGTTACAGC
AGCTCCTGCTACAATGGTAACAATCGGTTCGCCAGCCACACACGCTTCTCCTCTGTGGACAGCGCCAAGA
TCTCTGAGAGCACAGTCTTTTCTTCACAAGAGGATGAGGAAGAGGAAAACAGTGCATTCGAGTCGGTACC
CGACTCGGTGCAAAGCCCAGAGCTAGATCCCGAGTCTACAAATGGGGCTGGCCCTTGGCAGGATGAACTG
GCTGCCCCTGGTGGGAATGCAGCAAGAAGTACTGAAGGTCTGGAGTCCCCCATGGCAGGTCCTAGCAATA
GGAGAGAAGGTGAATGTCCTATACTCCATAATTCCCAGCCAATAAGCCAACTTCCTTCCTTGAGGCCTGA
ACATCATCACTACCCAACAATCGATGAGCCTCTTCCACCAAACTGGGAGGCTCGAATTGACAGCCATGGA
CGGGTCTTTTATGTGGACCATATAAATCGCACAACCACCTGGCAGCGACCATCGATGGCCCCTACCCCCG
ATGGAATGATCAGATCCGGGTCTGTCCACCAGATGGAGCAGCTTAACAGAAGGTATCAAAACATCCAGAG
GACCATGGCAACAGAGAGAGCTGAAGAAGATTCTGGCAATCAAAACTCTGAGCAAATACCAGACGGAGGA
GGAGGAGGTGGTGGTGGGAGTGACTCGGAAGCAGAATCATCCCAATCAAGCTTAGATCTGAGGAGAGAAG
GGTCACTTTCTCCTGTCAACTCACAGAAGGTCACCTTGCTGCTGCAGTCTCCAGCGGTCAAGTTCATCAC
CAATCCTGAGTTCTTCACTGTGTTGCATGCCAATTATAGTGCCTACAGGGTTTTCACAAGCAGCACTTGC
CTGAAGCATATGATTTTAAAAGTCCGAAGAGATGCTCGAAATTTTGAGCGCTATCAGCACAACCGGGACC
TGGTGAATTTCATCAACATGTTTGCAGATACTCGGCTGGAACTGCCCCGGGGTTGGGAGATCAAAACTGA
TCATCAGGGAAAGTCTTTCTTCGTGGACCACAACAGTCGAGCTACTACTTTCATAGATCCCCGAATCCCT
CTTCAGAATGGCCGTCTTCCCAATCATCTAACCCACCGACAGCACCTCCAGAGGCTCCGGAGTTACAGTG
CTGGGGAGGCCTCAGAAGTCTCTAGAAACAGAGGAGCATCTTTGCTGGCCAGACCAGGACACAGCCTAAT
AGCTGCTATTCGAAGCCAACATCAACATGAATCCTTGCCACTGGCATACAATGACAAGATTGTGGCATTT
CTTCGCCAGCCAAACATTTTTGAAATGCTACAAGAACGTCAGCCAAGCTTGGCAAGAAACCACACACTCA
GGGAGAAAATCCATTATATTCGGACAGAGGGCAATCATGGGCTTGATAAATTGTCCTGTGATGCAGATCT
AGTCATTTTGCTGAGTCTCTTTGAAGAAGAGATCATGTCCTATGTTCCCCTGCAATCTGCCTTCCACCCT
GGATATAGCTTCTCTCCCCGCTGTTCACCCTGTTCCTCACCTCAGAACTCCCCAGGTTTACAGAGAGCCA
GCGCAAGAGCCCCTTCACCATACCGAAGGGATTTTGAAGCTAAGCTCCGCAATTTCTACCGAAAACTGGA
AGCCAAAGGATTTGGACAGGGTCCGGGTAAAATTAAGCTCATCATCCGTCGAGACCACTTGTTGGAGGGG
ACCTTCAATCAAGTGATGGCATACTCAAGGAAGGAGCTCCAGAGAAACAAGCTCTACATCACCTTTGTTG
GAGAGGAGGGGCTGGACTACAGTGGCCCTTCTCGAGAGTTCTTCTTCCTGTTGTCTCAGGAGCTCTTCAA
CCCTTACTATGGACTCTTTGAGTATTCTGCAAATGACACATACACAGTACAGATCAGCCCCATGTCAGCA
TTTGTAGAAAACTATCTTGAATGGTTTAGATTCAGTGGTCGTATCCTGGGCCTAGCTCTGATCCATCAGT
ACCTCCTGGACGCTTTCTTCACAAGACCCTTCTATAAGGGACTCCTGAAGCTGCCATGTGATCTGAGTGA
CCTAGAATATTTGGATGAGGAATTCCACCAGAGTTTACAGTGGATGAAGGACAACAACATCACAGACATT
CTAGATCTCACCTTCACTGTTAATGAAGAAGTTTTTGGACAGGTAACAGAAAGAGAGTTGAAGTCTGGAG
GCGCCAACACGCAGGTGACTGAGAAAAACAAGAAGGAATACATAGAGAGGATGGTGAAGTGGCGTGTGGA
GCGTGGTGTGGTACAGCAGACGGAGGCATTGCTCAGGGGTTTCTATGAGGTTGTAGACTCAAGGCTCGTC
TCAGTGTTTGATGCGAGGGAACTGGAGCTGGTGATCGCTGGAACTGCTGAAATCGACCTGAATGACTGGA
GGAATAACACAGAGTACCGGGGAGGTTATCACGATGGCCACCTTGTGATCCGCTGGTTCTGGGCTGCAGT
GGAACGCTTCAATAATGAGCAGAGATTGCGATTACTTCAGTTTGTGACAGGAACATCAAGTGTGCCCTAT
GAAGGCTTTGCAGCTCTGCGGGGAAGCAATGGGCTTCGACGTTTCTGCATAGAAAAGTGGGGGAAGATTA
CATCTCTTCCCAGGGCACATACGTGCTTCAACCGATTGGATCTCCCACCATACCCTTCATATTCCATGTT
GTATGAAAAGCTGTTAACAGCAGTAGAAGAAACCAGCACCTTTGGACTTGAGTGA

Translation (1604 aa):
MLLHLCSVKNLYQNRFLGLAAMASPSRNSQSRRRCKEPLRYSYNPDQFHNIDIRNGAHDAITIPRSTSDT
DLVTSDSRSTLMVSSSYYSIGHSQDLVIHWDIKEEVDAGDWIGMYLIGEVSSENFLDYKNRGVNGSHRGQ
IIWKIDASSYFVESETKICFKYYHGVSGALRATTPSVTVKNSAAPIFKGIGSEETAQSQGSRRLISFSLS
DFQAMGLKKGMFFNPDPYLKISIQPGKHSIFPALPHHGQERRSTIIGNTVNPIWQAEHFSFVSLPTDVLE
IEVKDKFAKSRPIIKRFLGKLSMPVQRLLERHAIGDRVVSYTLGRRLPTDHVSGQLQFRFEITSSIHADD
EEISLSAEPESSAETQDSIMNSMVGNSNGEPSGDATEFCKDAKPESPSEGNGVNSSENQNQEHAGPVEEA
AGAMEARDGSNVSEAPEEPGELQDPEQHDTQPTLSAEEVAEGLPLDEDSPSSLLPEENTALGSKVEEETV
PENGAREEEMQKGKDEEEEEEDVSTLEQGEPGLELRVSVRKKSRPCSLPVSELETVIASACGDAETPRTH
YIRIHTLLHSMPSAQRGSTTEEEDGLEEESTLKESSEKDGLSEVDTIAADPQSMEDGESDGATLCMAPSD
CSGGHFSSLSKGIGAGQDGEAHPSTGSESDSSPQQGADHSCEGCDASCCSPSCYSTSCYSSSCYSSSCYS
SSCYNGNNRFASHTRFSSVDSAKISESTVFSSQEDEEEENSAFESVPDSVQSPELDPESTNGAGPWQDEL
AAPGGNAARSTEGLESPMAGPSNRREGECPILHNSQPISQLPSLRPEHHHYPTIDEPLPPNWEARIDSHG
RVFYVDHINRTTTWQRPSMAPTPDGMIRSGSVHQMEQLNRRYQNIQRTMATERAEEDSGNQNSEQIPDGG
GGGGGGSDSEAESSQSSLDLRREGSLSPVNSQKVTLLLQSPAVKFITNPEFFTVLHANYSAYRVFTSSTC
LKHMILKVRRDARNFERYQHNRDLVNFINMFADTRLELPRGWEIKTDHQGKSFFVDHNSRATTFIDPRIP
LQNGRLPNHLTHRQHLQRLRSYSAGEASEVSRNRGASLLARPGHSLIAAIRSQHQHESLPLAYNDKIVAF
LRQPNIFEMLQERQPSLARNHTLREKIHYIRTEGNHGLDKLSCDADLVILLSLFEEEIMSYVPLQSAFHP
GYSFSPRCSPCSSPQNSPGLQRASARAPSPYRRDFEAKLRNFYRKLEAKGFGQGPGKIKLIIRRDHLLEG
TFNQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSA
FVENYLEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLPCDLSDLEYLDEEFHQSLQWMKDNNITDI
LDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALLRGFYEVVDSRLV
SVFDARELELVIAGTAEIDLNDWRNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPY
EGFAALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEETSTFGLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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