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Report for CCDS12927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12927.1 Public Homo sapiens 19 ZNF579 24 110 108 CCDS HistoryNCBI Gene:163033Re-query CCDS DB by CCDS ID:12927.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325421.7 ENSP00000320188.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325421.7Link to Ensembl Protein Viewer:ENSP00000320188.3Re-query CCDS DB by Nucleotide ID:ENST00000325421Re-query CCDS DB by Protein ID:ENSP00000320188
Original member Current member NCBI NM_152600.3 NP_689813.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152600.3Link to Protein Sequence:NP_689813.2Re-query CCDS DB by Nucleotide ID:NM_152600Re-query CCDS DB by Protein ID:NP_689813Link to BLAST:NP_689813.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689813.2 562 Q8NAF0 562 100% 0 0

Chromosomal Locations for CCDS 12927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55577951 55579639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGGATCCGCAGCCTCCTCCACCCGCCCAGGGCAGCCCACCTCACCGTGGCCGAGGCCGGGGCCGTGGCC
GAGGCCGTGGTCGGGGCCGTGGCCGTGGCAGGGGGGGCGCTGGAGCCCCTAGGGCGCCCCTGCCCTGCCC
CACCTGCGGCCGCCTCTTCCGTTTCCCCTACTACCTCTCCCGGCACCGGCTGAGCCACTCGGGGCTCCGG
CCCCACGCCTGCCCGCTGTGCCCCAAGGCCTTCCGCCGGCCGGCCCACCTTTCCCGCCACCTGCGCGGCC
ACGGGCCCCAGCCCCCGCTGCGCTGCGCCGCCTGCCCCCGCACCTTCCCAGAACCGGCCCAGCTCAGGCG
CCACCTGGCTCAGGAGCACGCGGGCGGCGAGGTCGAGCTGGCCATCGAGAGGGTGGCCAAGGAGACGGCC
GAACCCAGCTGGGGCCCGCAGGACGAGGGCTCGGAGCCGCCCACCACCGCTGCAGCAGGGGCCACGGAGG
AGGAGGCGGTCGCAGCGTGGCCTGAGACGTGGCCTGCGGGGGAGCCTTCCACGCTGGCTGCGCCCACCAG
CGCCGCGGAGCCCCGGGAGTCGGAGTCGGAGGAGGCCGAGGCCGGGGCAGCAGAGCTGAGGGCCGAGCTG
GCGCTGGCGGCCGGGCGGCAGGAGGAGAAACAGGTCCTGCTCCAGGCAGACTGGACGCTGCTGTGTCTGC
GCTGCCGCGAAGCCTTCGCCACCAAGGGCGAGCTCAAGGCGCACCCGTGTCTGCGCCCCGAGGGCGAACA
GGAAGGGGAAGGGGGGCCCCCGCCACGCCCCAAGCGACACCAGTGCTCCATCTGCCTCAAGGCCTTCGCC
AGGCCCTGGTCCCTGTCGCGCCACCGGCTGGTCCACTCCACCGACCGCCCTTTCGTGTGCCCAGACTGCG
GCCTGGCCTTCCGCCTCGCCTCCTACCTCCGCCAGCACCGCCGCGTCCACGGCCCCCTCAGCCTGCTGGC
CCCGCTGCCCGCGGCGGGCAAGAAGGACGACAAGGCCTCGGGTGCACGGAACTCAGCCAAGGGGCCGGAG
GGGGGCGAGGGGGCGGAGTGCGGGGGTGCCTCGGAAGGGGGAGAAGGGCAGAACGGAGGCGACGCCGCCC
CGGCTCGGCCCCCCGCCGGGGAGCCCCGCTTCTGGTGCCCAGAGTGCGGCAAAGGTTTCAGGCGCCGGGC
GCACCTGCGGCAGCACGGGGTGACCCACTCGGGAGCGCGCCCCTTCCAGTGCGTGCGCTGCCAGCGGGAG
TTCAAGCGCCTGGCCGACCTGGCGCGCCACGCACAGGTGCACGCGGGGGGCCCAGCCCCGCACCCGTGCC
CCCGCTGCCCGCGCCGCTTCTCGCGCGCCTACAGCCTCCTGCGCCACCAGCGCTGCCACCGCGCAGAGCT
GGAGAGGGCCGCCGCGCTGCAGGCACTGCAGGCCCAGGCCCCGACGTCGCCGCCACCGCCCCCGCCGCCC
CTGAAGGCCGAGCAGGAGGAAGAAGGGCTCCCGCTGCCCCTCGCAAACATTAAGGAAGAGCCGCCCTCTC
CGGGGACCCCACCCCAGTCCCCGCCGGCTCCCCCTGTCTTCCTCAGCGCCTCCTGTTTCGACAGCCAAGA
CCACTCAGCCTTCGAGATGGAGGAGGAAGAGGTAGACAGCAAGGCTCACCTGCGCGGGCTGGGGGGCCTG
GCCTCCTGA

Translation (562 aa):
MDPQPPPPAQGSPPHRGRGRGRGRGRGRGRGRGRGGAGAPRAPLPCPTCGRLFRFPYYLSRHRLSHSGLR
PHACPLCPKAFRRPAHLSRHLRGHGPQPPLRCAACPRTFPEPAQLRRHLAQEHAGGEVELAIERVAKETA
EPSWGPQDEGSEPPTTAAAGATEEEAVAAWPETWPAGEPSTLAAPTSAAEPRESESEEAEAGAAELRAEL
ALAAGRQEEKQVLLQADWTLLCLRCREAFATKGELKAHPCLRPEGEQEGEGGPPPRPKRHQCSICLKAFA
RPWSLSRHRLVHSTDRPFVCPDCGLAFRLASYLRQHRRVHGPLSLLAPLPAAGKKDDKASGARNSAKGPE
GGEGAECGGASEGGEGQNGGDAAPARPPAGEPRFWCPECGKGFRRRAHLRQHGVTHSGARPFQCVRCQRE
FKRLADLARHAQVHAGGPAPHPCPRCPRRFSRAYSLLRHQRCHRAELERAAALQALQAQAPTSPPPPPPP
LKAEQEEEGLPLPLANIKEEPPSPGTPPQSPPAPPVFLSASCFDSQDHSAFEMEEEEVDSKAHLRGLGGL
AS


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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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