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Report for CCDS32126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32126.1 Public Homo sapiens 14 SAMD15 24 110 108 CCDS HistoryNCBI Gene:161394Re-query CCDS DB by CCDS ID:32126.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32126.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216471.5 ENSP00000216471.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216471.5Link to Ensembl Protein Viewer:ENSP00000216471.4Re-query CCDS DB by Nucleotide ID:ENST00000216471Re-query CCDS DB by Protein ID:ENSP00000216471
Original member Current member NCBI NM_001010860.4 NP_001010860.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010860.4Link to Protein Sequence:NP_001010860.1Re-query CCDS DB by Nucleotide ID:NM_001010860Re-query CCDS DB by Protein ID:NP_001010860Link to BLAST:NP_001010860.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010860.1 674 Q9P1V8-1 674 100% 0 0

Chromosomal Locations for CCDS 32126.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77377419 77379107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77380383 77380481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77391008 77391244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGGCTGAAGTCCCGGAGGATTATGATTCCGGCCCAGATGAAGATGGAGAGCTGGAGCCTGAGAGGCCTG
AACTGCCTGGACTTCATAAATTGTATGAAAATGCCGAACCAGACACCATGGCAAAGGCAGACTCGAAGCT
ACCAGCAGAGATTTACCAAGAGCCACAGCCAGAGACCGAGGAAGAGGACTTCAAAGAGGGGGAGCCAGAC
AGTGCTAAGAACGTGCAGCTGAAACCTGGCGGGACGTCCCAGGAAGGAATTGCCAAGGAGTCCAAGAGAG
ACGTACCAAGCGAAACTGAACCAGGGATACACCAAGAGGTAAAGTCGGAAACATCCAGAGAGATGGGAGA
GTTTTTCAAAGATTTGGAGGCCCCTATGGATGAAACGCATAAAGAGTCAGACCTAGAGCCACCAGAGGAG
GCTAAACCAAATGTTACAGAGGATGTGTTCCTAGAGTCAGCTATGGAAACAGATCCAGATCCAGTGCCAC
CAACGGAAACCATGTCTGAGGTTTCGGGGGCCACAGTCAGAGAGAGAAATTTAGAATTACTAGAGGAGGA
GACTGAACCGGGGGTTCCAGAGGAATCACTTAGAGTGCAACATGAAGAGACAGGTCTAGAGCCTCCAGAG
CAGACCAAACAAGATTTTCCAAGTGAGAAACTAGGAGAATCACTTGAAGAGACAGATCTTCAGCCACCAA
AGATGACCAAACCAGAGACTCCAGAGGAGACACAAAGAGAGTCAACTGAGAAGAAAAGGACAGAGCCACC
CGAGCAGGCTAGACTGGAATTTCTGGAGAAGGAACCAAGAAAGTCTAGTGAGGAGGCAGGTCTAGAGCCT
CCAGAAGAGACTCAACCAGAGGTTCCAGAGGAGATGCAAAGAAAGGCAACTGAGGAGAAAGGGACAGAAC
TACCTGAGCGGACTAAACCAGACTTTCCAGACCACAAGCCAAGAAAGTCTACTGATGAGAACGTTCCTGA
GCCACTAGAAGAGATCAAATTAGAGTTTCCTGAGGAAGAATCAAGAAAAACAAATGAGGAAACAATTCTA
GAACAATCAGAAATGATGAAACCAGAAAGTCCAGAAGAGATAAGAAAGTCAAATGAGAAAAAAAATCCAC
AGCCACCAGAGGAGACTGGTCCAGTGCTACCACAGGAGATCAACCCACAAGTTGAAGAGAAAACACAAAC
AAAGCCAACTGAGAAAATTCTAGAGTTACCAGATGAAACCAAACCAAGGGAGACACATGTAGAATTTTCC
AAGGAAGACAGGCCAGAACCAATAAAGTCTAAGTATTCTGTAGGAAACGATGAGCTAGAGCACCGTGAGC
CTAAAAGAGGAAAGTTGTCACTAAGTGACAAATTTAGAAAAGAATATTACGCATTAGGATCTCTCAGAGA
AAGTGAAGAATCAATTGGTACACATTATGAGTTTTTGCAACCACTCCAAAAATTGCTTAATGTCAGTGAA
GAATGCTCATACTCAGATCCCTCAGAGTCTCAGACAGAATTAAGTGAGTTCGTTCATGAAAAGGAAGTTG
TAGATTTGTCCCAAGAGTTGAAGGAACGGGTCTCTGAAGATGACGAAACCCAGCCAGAAAAAGGGACTGA
GTTACAATTTGAGCATCTTAATTGGGATCCAGAGGAAGTTGCAGAGTGGATTAGCCAGCTAGGCTTCCCT
CAATACAAGGAGTGTTTTATCACAAACTTCATCAGTGGCCGAAAACTCATTCACGTCAACTGCTCAAACC
TCCCTCAGATGGGGATAACAAACTTTGAGGACATGAAGGCAATTTCTCGGCATACGCAGGAGCTCCTGGA
AATTGAAGAGCCATTATTCAAACGCTCCATCAGCCTTCCCTATAGGGATATTATCGGCTTATATTTAGAG
CAAAAAGGTCATACTGGGATAAAATCTGATTCCTTGACTTTATCTGAATTTGTCAAAGCAGCAGGATTAC
AGGATTATGCTCCAGAAATAACTGCCCCTGAAGAGAATGAGGAATTACCTTGCACTGAACCATAG

Translation (674 aa):
MAEVPEDYDSGPDEDGELEPERPELPGLHKLYENAEPDTMAKADSKLPAEIYQEPQPETEEEDFKEGEPD
SAKNVQLKPGGTSQEGIAKESKRDVPSETEPGIHQEVKSETSREMGEFFKDLEAPMDETHKESDLEPPEE
AKPNVTEDVFLESAMETDPDPVPPTETMSEVSGATVRERNLELLEEETEPGVPEESLRVQHEETGLEPPE
QTKQDFPSEKLGESLEETDLQPPKMTKPETPEETQRESTEKKRTEPPEQARLEFLEKEPRKSSEEAGLEP
PEETQPEVPEEMQRKATEEKGTELPERTKPDFPDHKPRKSTDENVPEPLEEIKLEFPEEESRKTNEETIL
EQSEMMKPESPEEIRKSNEKKNPQPPEETGPVLPQEINPQVEEKTQTKPTEKILELPDETKPRETHVEFS
KEDRPEPIKSKYSVGNDELEHREPKRGKLSLSDKFRKEYYALGSLRESEESIGTHYEFLQPLQKLLNVSE
ECSYSDPSESQTELSEFVHEKEVVDLSQELKERVSEDDETQPEKGTELQFEHLNWDPEEVAEWISQLGFP
QYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISRHTQELLEIEEPLFKRSISLPYRDIIGLYLE
QKGHTGIKSDSLTLSEFVKAAGLQDYAPEITAPEENEELPCTEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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