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Report for CCDS73997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73997.1 Public Homo sapiens 17 ZNF286A 24 110 108 CCDS HistoryNCBI Gene:57335Re-query CCDS DB by CCDS ID:73997.1Re-query CCDS DB by GeneID:57335See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73997.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412988.6 ENSP00000408168.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412988.6Link to Ensembl Protein Viewer:ENSP00000408168.2Re-query CCDS DB by Nucleotide ID:ENST00000412988Re-query CCDS DB by Protein ID:ENSP00000408168
Original member Current member EBI ENST00000593105.5 ENSP00000466154.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593105.5Link to Ensembl Protein Viewer:ENSP00000466154.1Re-query CCDS DB by Nucleotide ID:ENST00000593105Re-query CCDS DB by Protein ID:ENSP00000466154
Original member Current member EBI ENST00000686922.1 ENSP00000508754.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686922.1Link to Ensembl Protein Viewer:ENSP00000508754.1Re-query CCDS DB by Nucleotide ID:ENST00000686922Re-query CCDS DB by Protein ID:ENSP00000508754
Original member Current member NCBI NM_001288643.2 NP_001275572.1 Accepted alive Link to Nucleotide Sequence:NM_001288643.2Link to Protein Sequence:NP_001275572.1Re-query CCDS DB by Nucleotide ID:NM_001288643Re-query CCDS DB by Protein ID:NP_001275572Link to BLAST:NP_001275572.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275572.1 511 Q9HBT8-2 511 100% 0 0

Chromosomal Locations for CCDS 73997.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 15699771 15699777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15701152 15701240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15706387 15706501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15708155 15708247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15716059 15717290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGGGAGCTCTGTCTTCCCAGGATTCTCCCCATTTCCAAGAGAAGAGCACAGAAGAGGGAGAAGTGGCTG
CTCTGCGCCTCACGGCCAGATCCCAGGAAACAGTGACATTCAAGGATGTGGCCATGGACTTTACACCAGA
GGAGTGGGGGAAGCTGGATCCTGCACAAAGGGATGTGATGCTGGAGAACTATAGGAACCTAGTCTCACTT
TGGCTTCCAGTTTCCAAACCTGAGAGCTACAACTTGGAGAATGGAAAAGAACCATTGAAGCTTGAGAGAA
AAGCCCCCAAAAGCAGCTATTCAGACATGGAGACTAGACCACAGAGCAAGGATTCAACTTCAGTGCAAGA
TTTTTCCAAAGCAGAATCATGCAAAGTTGCAATAATAGACAGACTGACACGGAATAGTGTCTATGACTCT
AACTTGGAAGCAGCCCTTGAATGTGAAAATTGGTTAGAGAATCAGCAAGGAAATCAGGAGAGACATTTGA
GAGAAATGTTCACTCACATGAATTCACTCTCTGAGGAAACAGACCATAAGCATGATGTATACTGGAAAAG
CTTCAATCAGAAATCTGTCCTTATCACTGAAGACAGAGTTCCCAAAGGATCTTATGCCTTCCATACACTT
GAAAAAAGCTTGAAACAAAAATCAAACTTAATGAAAAAGCAGAGAACTTATAAAGAGAAAAAACCTCATA
AATGTAATGATTGTGGTGAACTCTTCACCTACCATTCAGTGCTTATTCGACACCAGAGAGTCCATACTGG
AGAGAAACCCTATACCTGCAATGAATGTGGGAAATCTTTTAGCCACAGAGCTAATTTAACTAAACACCAG
AGAACTCATACTAGAATTCTCTTTGAATGCAGTGAATGCAAGAAAACCTTCACAGAAAGCTCATCCCTTG
CAACACATCAGAGAATTCACGTTGGAGAGAGACCTTATGAATGCAATGAATGTGGGAAAGGTTTTAATCG
AAGTACACATCTTGTGCAGCATCAGTTGATTCATACTGGAGTGAAGCCTTATGAATGTAATGAATGTGAT
AAAGCTTTTATTCATTCATCAGCACTCATTAAACATCAAAGAACTCATACTGGAGAGAAACCTTATAAAT
GTCAAGAATGTGGGAAAGCCTTTAGCCATTGCTCATCCCTAACTAAGCATCAGAGAGTTCATACTGGAGA
AAAGCCATATGAATGCAGTGAATGTGGAAAAACTTTTAGTCAGAGCACACATCTTGTTCAACATCAGAGA
ATTCACACTGGAGAGAAACCCTATGAGTGTAATGAATGTGGGAAAACCTTCAGCCGGAGCTCCAATTTTG
CTAAACATCAAAGAATTCATATTGGAAAGAAACCGTACAAATGTAGCGAGTGTGGAAAAGCCTTCATTCA
TTCATCAGCTCTCATTCAACATCAGAGAACTCATACCGGAGAGAAACCCTTTAGATGTAATGAGTGTGGG
AAAAGCTTTAAGTGCAGTTCATCTCTCATCAGACATCAAAGAGTTCACACTGAAGAGCAACCCTGA

Translation (511 aa):
MGALSSQDSPHFQEKSTEEGEVAALRLTARSQETVTFKDVAMDFTPEEWGKLDPAQRDVMLENYRNLVSL
WLPVSKPESYNLENGKEPLKLERKAPKSSYSDMETRPQSKDSTSVQDFSKAESCKVAIIDRLTRNSVYDS
NLEAALECENWLENQQGNQERHLREMFTHMNSLSEETDHKHDVYWKSFNQKSVLITEDRVPKGSYAFHTL
EKSLKQKSNLMKKQRTYKEKKPHKCNDCGELFTYHSVLIRHQRVHTGEKPYTCNECGKSFSHRANLTKHQ
RTHTRILFECSECKKTFTESSSLATHQRIHVGERPYECNECGKGFNRSTHLVQHQLIHTGVKPYECNECD
KAFIHSSALIKHQRTHTGEKPYKCQECGKAFSHCSSLTKHQRVHTGEKPYECSECGKTFSQSTHLVQHQR
IHTGEKPYECNECGKTFSRSSNFAKHQRIHIGKKPYKCSECGKAFIHSSALIQHQRTHTGEKPFRCNECG
KSFKCSSSLIRHQRVHTEEQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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