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Report for CCDS22911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22911.1 Public Mus musculus 9 Kank2 23 108 98 CCDS HistoryNCBI Gene:235041Re-query CCDS DB by CCDS ID:22911.1Re-query CCDS DB by GeneID:235041See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22911.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034717.6 ENSMUSP00000034717.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034717.6Link to Ensembl Protein Viewer:ENSMUSP00000034717.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000034717Re-query CCDS DB by Protein ID:ENSMUSP00000034717
Original member Current member NCBI NM_145611.4 NP_663586.3 Accepted alive Link to Nucleotide Sequence:NM_145611.4Link to Protein Sequence:NP_663586.3Re-query CCDS DB by Nucleotide ID:NM_145611Re-query CCDS DB by Protein ID:NP_663586Link to BLAST:NP_663586.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663586.3 843 Q8BX02-1 843 100% 0 0

Chromosomal Locations for CCDS 22911.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21768951 21769004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21769754 21769843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21769926 21770126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21772745 21772887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21774533 21774752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21775701 21775788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21779701 21779937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21780379 21780469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21780560 21780703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21794457 21795683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21796080 21796116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2532 nt):
ATGGCCCAGGTCCTGCATGTGCCCGCCCCATTCCCAGGAACCCCTGGTCAGGCCTCCCCAGCGGCCTTCC
CCAGCAAGGAGCCAGACCCACCGTACTCAGTGGAAACGCCCTATGGCTACCGCCTGGACCTGGATTTTCT
TAAGTACGTGGATGACATTGAGAAGGGCCACACACTGCGCAGGGTGGCGGTACAGCGCCGGCCGCGCCTG
GGTTCCCTGCCACGGGGCCCGGGCTCCTGGTGGACGTCCACAGAGTCTCTGTGCTCTGATGCCAGTGGGG
ACAGCCGGCACTCGGCCTACTCCTACTGTGGCCGCGGCTTCTACCCACAGTACGGAGCCTTGGAGACCCG
AATCGGCTCCAACCCTCGTGTGGAGCGCACGCTGCTGGATGCGCGGCGCCGGCTGGAGGACCAGGCGGCT
GCCCCATCGTCCGGTGGCCTGGGCTCCCTCACACCCAGCGCCGCGGGCTCCACCAGCTCCCTGGCAGGCG
TGGGCCTGCTGCCCCCCACGCCTCGCAGCTCCGGCCTGTCCACCCCGGTGGCACCCAGCGCTGGTCACCT
AGCCCACGTGCGCGAGCAGATGGCTGGAGCCCTGCGCAAGCTGCGCCAGCTGGAGGAGCAGGTCAAGCTG
ATCCCCGTTCTCCAAGTCAAGCTGTCAGTGCTCCAGGAGGAAAAGAGACAGCTCACCGTGCAGCTCAAGA
GCCAGAAGTTTCTAGGTCACCCCTCAGGGACACGGAGCCGGAGTGAGCTCTGCCTGGACCTTCCCGAGGC
CCCTGACGACCCTGCTGCACTAGAGACCCGCTCGGTGGGCACCTGGGTTAGAGAACGGGACTTGGGCATT
CCAGATGGTGAAGCTGCCCTGGTAGCTAAAGTGGCCGTGTTGGAGACCCAGCTCAAAAAAGCGCTACAGG
AGCTGCGGGCGGCTCAGACCCAGCAGGTCGACCTCCAGCCCCAGGCCTGGCCACCACCAGACACCCAGGT
CCGCGTGGACACCGTGCGAGTAGTGGAGGGTCCCCGGGAAGTGGAGGTGGCAGCCAGCACGGCAGCCGGG
GCCCTTGCACAGCGAGCTCAGAGTCTGGAACCCTACGGAACAGGGCTGAAGGCCCTGACCACATCTGGGG
GACCAGAGAACACCCTCGTGTTCCGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGCTAC
CACTGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTGCACCGGTGCACCCAGGATG
ACAGAGCCTTCCTCCGTTAATCCACGCCCTGCTGCAGCCTCTGTGGTACAGCCTGAGAACCCTGTCCCGG
CTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAGCATCGCAGGACTCACAAGCGGCTGA
CGGAGCAGGCAGAGCCTCTTTGGCCACGAAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAACCAGAGG
AACCTCCAGTTTGTGGGAGTCAATGGCGGGTATGAGTCCCCCTCGGAGGACTCCAGCACAGCAGAAAACT
CCGAACACGAGAGCACAGAGAACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCC
TCAGCTCAGGCCTCCAGGGGCTGCAGTGGCCACGACCAGTCTGGAGGGGCCCCAGCTCTCCCAGGAATCC
CAGCGTGTGCCTGCACCTGAGGTGGCGTCAGGACCCGATCCTGAGGAGGAAATTCGGATGGATCTGAGCC
CTGACCTCATATCAGCCTGCTTGGCCCTGGAGAAATACCTGGAGAACCCCAATGCCCTCACAGAGCGAGA
ACTGAAAGTGGCCTATACCACAGTGCTTCAGGAGTGGCTGCGCCTGGCCTGCCGCAGTGACGCACACCCT
GAGCTTGTGCGGCGACATCTAGTCACCTTCAGGGCCATGTCTGCCCGGCTGCTGGACTACGTGGTCAACA
TCGCCGACAGCAATGGTAACACTGCCCTGCACTACTCAGTGTCACACGCCAACTTCCCTGTGGTGCGGCA
GTTGCTGGACAGCGGGGTCTGTCATGTGGACAAGCTGAACCGTGCCGGCTACAGCCCTATTATGCTCACT
GCCCTGGCCACGTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCCGGCTTGGGAATGTCA
ATGCCAAAGCCAGCCAGGCAGGACAGACGGCCCTGATGCTGGCCGTCAGCCACGGGCGGGTGGACGTGGT
GAGAGCATTGCTGGCCTGTGAGGCGGACGTCAACATTCAGGATGAGGACGGCTCCACGGCCCTGATGTGT
GCATGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCCTAGCTGTGACATCTCACTCA
CTGACCGCGACGGGAGCACAGCACTGATGGTGGCCCTGGACGCTGGGCAGAGCGAGATCGCATCTATGCT
GTACTCACGCATGAACATCAAGTGCTCGTTCGCTCCCATGTCAGACTACGAGAGTCCGGCTTCGTCTTCA
GCCGAGGAGTGA

Translation (843 aa):
MAQVLHVPAPFPGTPGQASPAAFPSKEPDPPYSVETPYGYRLDLDFLKYVDDIEKGHTLRRVAVQRRPRL
GSLPRGPGSWWTSTESLCSDASGDSRHSAYSYCGRGFYPQYGALETRIGSNPRVERTLLDARRRLEDQAA
APSSGGLGSLTPSAAGSTSSLAGVGLLPPTPRSSGLSTPVAPSAGHLAHVREQMAGALRKLRQLEEQVKL
IPVLQVKLSVLQEEKRQLTVQLKSQKFLGHPSGTRSRSELCLDLPEAPDDPAALETRSVGTWVRERDLGI
PDGEAALVAKVAVLETQLKKALQELRAAQTQQVDLQPQAWPPPDTQVRVDTVRVVEGPREVEVAASTAAG
ALAQRAQSLEPYGTGLKALTTSGGPENTLVFRSHEVVETMCPLPTATTGNVHTAKKISITERSCTGAPRM
TEPSSVNPRPAAASVVQPENPVPAAQDTTDKKPTRPAAASQDSQAADGAGRASLATKRKEDPADPEVNQR
NLQFVGVNGGYESPSEDSSTAENSEHESTENEGPEPPARVLSPAECPQLRPPGAAVATTSLEGPQLSQES
QRVPAPEVASGPDPEEEIRMDLSPDLISACLALEKYLENPNALTERELKVAYTTVLQEWLRLACRSDAHP
ELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVRQLLDSGVCHVDKLNRAGYSPIMLT
ALATLKTQDDIETILQLFRLGNVNAKASQAGQTALMLAVSHGRVDVVRALLACEADVNIQDEDGSTALMC
ACEHGHKEITGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSS
AEE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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