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Report for CCDS31282.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31282.1 Public Homo sapiens 10 CFAP58 24 110 108 CCDS HistoryNCBI Gene:159686Re-query CCDS DB by CCDS ID:31282.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31282.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369704.8 ENSP00000358718.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369704.8Link to Ensembl Protein Viewer:ENSP00000358718.3Re-query CCDS DB by Nucleotide ID:ENST00000369704Re-query CCDS DB by Protein ID:ENSP00000358718
Original member Current member NCBI NM_001008723.2 NP_001008723.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008723.2Link to Protein Sequence:NP_001008723.1Re-query CCDS DB by Nucleotide ID:NM_001008723Re-query CCDS DB by Protein ID:NP_001008723Link to BLAST:NP_001008723.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008723.1 872 Q5T655 872 100% 0 0

Chromosomal Locations for CCDS 31282.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 104353898 104353906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104358341 104358622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104362023 104362171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104364733 104364889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104365814 104366008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104368423 104368560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104370895 104371054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104376811 104376893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104380029 104380220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104392233 104392394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104393329 104393475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104399360 104399500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104400680 104400903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104403729 104403840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104406689 104406793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104447698 104447817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104450071 104450204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 104454422 104454530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2619 nt):
ATGGCTGAGGAAAAGGGTGGAAAGCAAGTCCTGGAAGAATCTGCATTTGAAGAAATGGAAAGAGATTTTC
AG
GGAGTTCTCCATGAACTTTCTGGAGACAAAAGTTTGGAAAAATTTCGGATTGAATATGAGAGGCTTCA
T
GCTGTCATGAAAAAGTCTTATGACAATGAAAAGCGTCTGATGGCCAAATGCAGAGAGCTAAATGCAGAG
ATT
GTAGTGAATTCTGCGAAGGTCGCCACTGCCCTTAAGCTCTCTCAGGATGATCAGACCACCATTGCAT
CC
CTAAAGAAGGAAATTGAAAAGGCCTGGAAGATGGTGGACTCAGCCTATGACAAAGAGCAGAAGGCCAA
G
GAGACGATTCTTGCTCTGAAAGAGGAAATAGTGAACCTGACCAAACTAGTGGAGCAGGGGTCTGGACTG
TCA
ATGGACCAGCATAGCAACATCCGAGATTTACTGAGGTTCAAAGAAGAAGTGACAAAGGAGAGAGACC
AG
CTCTTATCAGAAGTGGTAAAATTACGAGAATCCCTAGCTCAGACCACTGAACAGCAGCAGGAAACAGA
G
CGATCAAAAGAGGAGGCTGAACATGCCATCAGTCAGTTCCAACAAGAAATCCAGCAACGTCAGAACGAA
GCT
TCCCGGGAGTTCCGGAAGAAGGAAAAACTAGAGAAAGAGCTCAAGCAGATTCAGGCAGACATGGACA
GC
AGGCAGACAGAAATAAAAGCCCTGCAGCAGTATGTGCAGAAGAGCAAGGAGGAGCTTCAGAAGCTGGA
G
CAGCAGCTGAAGGAGCAGAAGATATTGAATGAGAGAGCTGCAAAGGAACTCGAGCAATTTCAGATGAGA
AAT
GCTAAACTTCAGCAAGAGAATGAACAGCACAGTTTGGTCTGTGAGCAGCTATCCCAGGAAAACCAAC
AG
AAGGCGTTGGAGCTCAAAGCCAAAGAGGAAGAAGTCCATCAAATGCGCCTTGACATCGGGAAGCTCAA
C
AAAATCAGAGAACAAATTCATAAGAAATTGCACCACACCGAAGATCAAAAGGCAGAAGTCGAACAGCAC
AAA
GAAACCCTAAAAAATCAGATTGTGGGATTAGAGAGAGAGGTAGAGGCTTCAAAGAAACAAGCAGAAC
TT
GACAGAAAGGCAATGGACGAGCTTCTAAGAGAAAGGGACATACTAAATAAGAACATGCTTAAGGCGGT
C
AATGCGACCCAGAAGCAGACAGACTTGGTAAAGCTCCATGAACAAGCCAAGAGGAACCTGGAGGGAGAA
ATC
CAGAACTACAAGGATGAGGCTCAGAAGCAGAGAAAGATCATCTTTCATCTGGAAAAGGAGCGTGACC
GG
TACATCAACCAAGCCAGTGACCTTACGCAAAAGGTCCTTATGAACATGGAAGACATAAAAGTTCGTGA
A
ACACAGATTTTTGACTACAGGAAAAAAATAGCTGAATCAGAGATTAAATTAAAACAGCAACAGAACCTA
TAT
GAAGCTGTGAGATCAGACAGAAATCTGTATAGCAAAAATCTGGTTGAGGCTCAGGATGAAATAACAG
AT
ATGAAGAGAAAGTTAAAGATTATGATCCATCAGGTAGATGAGCTGAAAGAAGACATCTCTGCCAAAGA
G
TCCGCACTTGTGAAGCTGCACCTGGAACAGCAGCGAATAGAAAAGGAAAAGGAAACATTGAAGGCTGAG
CTG
CAGAAGCTGAGACAACAAGCCCTGGAGACAAAACACTTTATTGAAAAGCAAGAAGCTGAAGAGAGAA
AA
CTCCTGCGAATAATTGCTGAGGCTGACGGGGAGAGGTTGAGACAGAAGAAGGAATTAGACCAGGTCAT
C
AGTGAGAGAGATATCCTGGGGTCTCAGCTTGTTCGGCGCAATGATGAGTTAGCTTTGCTCTATGAGAAG
ATC
AAGATCCAACAGTCTGTGCTGAATAAAGGGGAGAGCCAGTACAACCAGAGGTTGGAGGACATGAGAA
TC
CTCAGACTTGAGATCAAGAAGCTTCGCCGGGAAAAGGGGATTCTTGCCAGGAGTATGGCTAATGTTGA
A
GAACTCAGACAGGAGTTTTTTCACATGCAAAGAGAATTGTTGAAGGAGAGGACACGCTGCCGAGCCCTG
GAG
GAGGAGCTGGAGAATCCCCTGAATGTGCACAGATGGAGGAAGCTCGAGGCCAGCGACCCCAATGCAT
AT
GAGCTGATACAGAAAATTCACACCCTGCAGAAGCGTCTCATCAGCAAGACTGAAGAGGTGGTTGAAAA
A
GAGCTGCTCCTCCAGGAAAAGGAGAAACTCTACATGGAACTAAAGCACGTCTTGGCCCGCCAGCCTGGA
CCT
GAGGCTGCGGAACAGCTGAAGCTGTACCGACGCACGCTGCATGACAAGAAGCAGCAGCTGAAAGTTT
TG
TCTTCAGAATTGAATATGTATGAAGTACAGAGCAAAGAATATAAATATGAGGTAGAGAAACTTACCAA
T
GAGCTCCAGAATTTAAAGAAGAAATACCTCGCTCAGAAACGTAAAGAACAACTTCAAAAAAACAAGGAC
ACA
GCACCCATGGATAACACCTTCTTAATGGTCAAACCAAATGGTCCTGGTTTTACTGGGGGCGGATTTC
CT
CTCAGGTCAACCAAAATGACGTTCTAA


Translation (872 aa):
MAEEKGGKQVLEESAFEEMERDFQGVLHELSGDKSLEKFRIEYERLHAVMKKSYDNEKRLMAKCRELNAE
I
VVNSAKVATALKLSQDDQTTIASLKK
EIEKAWKMVDSAYDKEQKAKETILALKEEIVNLTKLVEQGSGL
S
MDQHS
NIRDLLRFKEEVTKERDQLLSEVVKLRESLAQTTEQQQETERSKEEAEHAISQFQQEIQQRQNE
A
SREFRKKEKLEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQK
ILNERAAKELEQFQMR
N
AKLQQENEQHSLVCEQLSQENQQKALELK
AKEEEVHQMRLDIGKLNKIREQIHKKLHHTEDQKAEVEQH
K
ETLKNQIVGLER
EVEASKKQAELDRKAMDELLRERDILNKNMLKAVNATQKQTDLVKLHEQAKRNLEGE
I
QNYKDEAQKQRKIIFHLEKERDRYINQASDLTQK
VLMNMEDIKVRETQIFDYRKKIAESEIKLKQQQNL
Y
EAVRSDRNLYSKNLVEAQ
DEITDMKRKLKIMIHQVDELKEDISAKESALVKLHLEQQRIEKEKETLKAE
L
QKLRQQALETKHFIEKQEAEERKLLRIIAEADGERLRQKKELDQ
VISERDILGSQLVRRNDELALLYEK
I
KIQQSVLNKGESQYNQRLEDMRILRLEIKKLRREKGILARSMANVEEL
RQEFFHMQRELLKERTRCRAL
E
EELENPLNVHRWRKLE
ASDPNAYELIQKIHTLQKRLISKTEEVVEKELLLQEKEKLYMELKHVLARQPG
P
EAAEQLKLYRRTLHDKKQQLK
VLSSELNMYEVQSKEYKYEVEKLTNELQNLKKKYLAQKRKEQLQKNKD
T
APMDNTFLMVKPNGPGFTGGGFPLRSTKMTF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser