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Report for CCDS27608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27608.1 Public Mus musculus 15 Cacng2 23 108 98 CCDS HistoryNCBI Gene:12300Re-query CCDS DB by CCDS ID:27608.1Re-query CCDS DB by GeneID:12300See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27608.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019290.2 ENSMUSP00000019290.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019290.2Link to Ensembl Protein Viewer:ENSMUSP00000019290.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000019290Re-query CCDS DB by Protein ID:ENSMUSP00000019290
Original member Current member NCBI NM_007583.2 NP_031609.1 Accepted alive Link to Nucleotide Sequence:NM_007583.2Link to Protein Sequence:NP_031609.1Re-query CCDS DB by Nucleotide ID:NM_007583Re-query CCDS DB by Protein ID:NP_031609Link to BLAST:NP_031609.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031609.1 323 O88602 323 100% 0 0

Chromosomal Locations for CCDS 27608.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 77995149 77995684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 77996851 77996991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78013313 78013396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78118681 78118891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGGGCTGTTTGATCGAGGTGTTCAAATGCTTTTAACCACCGTTGGTGCTTTCGCTGCCTTCAGCTTGA
TGACCATCGCTGTGGGAACCGACTATTGGCTGTACTCCAGAGGGGTTTGCAAGACCAAAAGTGTCAGTGA
GAATGAAACCAGCAAGAAGAACGAGGAAGTTATGACCCATTCCGGATTATGGAGAACCTGCTGCCTCGAA
GGGAACTTCAAAGGTCTGTGCAAGCAAATCGACCACTTTCCGGAAGACGCGGACTACGAAGCTGACACCG
CAGAGTATTTCCTCCGGGCCGTGAGGGCCTCGAGTATCTTCCCGATCCTGAGTGTGATCCTGCTTTTCAT
GGGTGGCCTCTGCATCGCGGCGAGCGAGTTCTACAAGACACGCCACAACATCATCCTGAGTGCTGGCATC
TTCTTCGTGTCTGCAGGTCTTAGTAATATCATCGGGATCATCGTGTATATATCAGCCAATGCTGGAGACC
CCTCCAAGAGTGACTCCAAAAAGAACAGCTACTCCTACGGCTGGTCCTTCTACTTCGGGGCCCTGTCCTT
CATCATCGCCGAGATGGTCGGGGTGCTGGCCGTGCACATGTTTATCGACCGCCACAAACAGCTGCGGGCC
ACGGCCCGCGCCACCGACTACCTCCAGGCCTCCGCCATCACCCGCATCCCCAGCTACCGCTACCGCTACC
AGCGCCGCAGCCGCTCCAGCTCGCGCTCCACCGAGCCCTCTCACTCCAGAGACGCCTCGCCCGTGGGCGT
GAAGGGCTTCAACACCCTGCCGTCCACGGAGATCTCCATGTACACCCTCAGTAGGGACCCCCTGAAGGCT
GCCACCACGCCCACCGCCACCTACAACTCGGACAGGGATAACAGCTTTCTCCAGGTCCACAACTGTATCC
AGAAGGACAGCAAGGACTCTCTCCACGCCAACACAGCCAACCGCCGGACCACGCCCGTATGA

Translation (323 aa):
MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTHSGLWRTCCLE
GNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRHNIILSAGI
FFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRA
TARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHSRDASPVGVKGFNTLPSTEISMYTLSRDPLKA
ATTPTATYNSDRDNSFLQVHNCIQKDSKDSLHANTANRRTTPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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