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Report for CCDS22584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22584.1 Public Mus musculus 8 Rrad 23 108 98 CCDS HistoryNCBI Gene:56437Re-query CCDS DB by CCDS ID:22584.1Re-query CCDS DB by GeneID:56437See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034351.7 ENSMUSP00000034351.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034351.7Link to Ensembl Protein Viewer:ENSMUSP00000034351.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034351Re-query CCDS DB by Protein ID:ENSMUSP00000034351
Original member Current member NCBI NM_019662.3 NP_062636.2 Accepted alive Link to Nucleotide Sequence:NM_019662.3Link to Protein Sequence:NP_062636.2Re-query CCDS DB by Nucleotide ID:NM_019662Re-query CCDS DB by Protein ID:NP_062636Link to BLAST:NP_062636.2

Chromosomal Locations for CCDS 22584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 104628451 104628728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104629521 104629725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104629826 104629899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104630547 104630913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGACCCTGAATGGTGGCAGCGGAGCAAGCGGGAGCCGTGGTGCGGGCCGGGAGCGCGACCGCCGTCGAG
GCAGCACCCCATGGGGCCCGGCACCCCCACTGCACCGCAGGAGCATGCCGGTGGACGAGCGAGACCTTCA
GGCGGCGCTAGCCCCGGGCTCCCTGGCAACGACTGCCGCTGGAACTCGGACACAGGGCCAGAGGCTGGAC
TGGCCCGAAGGCTCCTCCGACTCGCTCAGTTCTGGAGGCAGTGGGTCAGAGGAGGGCGTTTACAAGGTGC
TGCTGCTCGGGGCGCCTGGTGTGGGCAAAAGCGCTCTGGCGCGCATCTTTGGTGGTATAGAAGACGGACC
TGAAGCAGAAGCAGCAGGGCACACATATGACCGTTCTATCACTGTGGATGGAGAAGAAGCGTCACTATTG
GTCTATGACATTTGGGAACAGGATGGGGGCTGCTGGCTGCCTGGCCACTGCATGGCCATGGGGGATGCAT
ACGTCATCGTGTACTCCATCACGGACAAGGGCAGCTTTGAGAAAGCCTCAGAACTCCGGGTCCAGCTGCG
GCGGGCCCGGCAGACAGACGACGTGCCCATCATTCTCGTGGGCAACAAGAGTGACCTGGTGCGCTCTCGT
GAGGTCTCTGTGGATGAGGGCCGGGCCTGCGCAGTGGTCTTCGACTGCAAGTTCATCGAGACATCAGCAG
CACTGCATCACAATGTCCAGGCACTATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAA
AGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTT
CTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCAAGTCCTGCCATGACC
TCTCTGTTCTCTAA

Translation (307 aa):
MTLNGGSGASGSRGAGRERDRRRGSTPWGPAPPLHRRSMPVDERDLQAALAPGSLATTAAGTRTQGQRLD
WPEGSSDSLSSGGSGSEEGVYKVLLLGAPGVGKSALARIFGGIEDGPEAEAAGHTYDRSITVDGEEASLL
VYDIWEQDGGCWLPGHCMAMGDAYVIVYSITDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSR
EVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRRDSKEDNARRQAGTRRRESLGKKAKRF
LGRIVARNSRKMAFRAKSKSCHDLSVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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