NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS91871.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91871.1 Public Homo sapiens 14 TTC6 24 110 108 CCDS HistoryNCBI Gene:319089Re-query CCDS DB by CCDS ID:91871.1Re-query CCDS DB by GeneID:319089See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91871.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267368.11 ENSP00000267368.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000267368.11Link to Ensembl Protein Viewer:ENSP00000267368.7Re-query CCDS DB by Nucleotide ID:ENST00000267368Re-query CCDS DB by Protein ID:ENSP00000267368
Original member Current member EBI ENST00000476979.5 ENSP00000417788.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000476979.5Link to Ensembl Protein Viewer:ENSP00000417788.1Re-query CCDS DB by Nucleotide ID:ENST00000476979Re-query CCDS DB by Protein ID:ENSP00000417788
Original member Current member NCBI NM_001368142.2 NP_001355071.1 Accepted alive Link to Nucleotide Sequence:NM_001368142.2Link to Protein Sequence:NP_001355071.1Re-query CCDS DB by Nucleotide ID:NM_001368142Re-query CCDS DB by Protein ID:NP_001355071Link to BLAST:NP_001355071.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355071.1 520 Q86TZ1-1 520 100% 0 0

Chromosomal Locations for CCDS 91871.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 37796310 37796370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37796787 37796947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37804680 37804814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37808733 37808846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37812314 37812433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37817578 37817651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37823747 37823957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37826195 37826347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37827196 37827366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37841445 37841670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37842155 37842291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGATGAAATATTATGATCTTGCAAAGTTTACTATTTATCAAATAGCAGAAATGGACAAAGGTCTCAGTG
AGTTGAGTCCTATGCAGCAAGCCCTTATTTATTCATTTTGTGAAAACCATGACAAGGCCATTGAGGTCTT
GGACGGAATCAGCTGGAATAGAGCTGAGATGACCATGTGTGCTCTATTAGCAAAAGTTCAAATGAAGGCC
AAGAGAACCAAGGAAGCTGTGGAAGTGCTTAAGAAGGCTTTGGATGCCATTTCTCATTCTGATAAAGGAC
CAGATGCCACAGCAATTTCAGCAGACTGTCTGTATAACTTGGGTCTTTGTTACATGGAGGAAGGCAATTT
ACAAATGACTTATAAGCTAGCAATTACAGATTTAACTACAGCTATCAGCATGGACAAAAATAGTTATACA
GCATTTTATAACAGAGCATTATGTTACACCAAGATAAGGGAACTTCAAATGGCATTAACAGATTATGGAA
TTGTGCTGCTTCTTGATGCTACAGAAACTGTAAAACTAAATACCTTCCTTAATCGTGGACTCATCTACGT
AGAACTAGGCCAGTATGGCTTTGCACTAGAGGATTTTAAACAAGCTGCACTGATAAGCCGGACTAACGGG
AGCCTTTGTCACGCCACTGCCATGTGCCATCACAGAATTAATGAGTTTGAAGAAGCTGTCAATTTCTTTA
CTTGGGCTCTTAAAATTAACCCATGTTTTCTGGATGCTTATGTTGGACGGGGAAATTCTTACATGGAATA
CGGTCATGATGAAGCCACCAAGCAAGCACAGAAAGACTTTCTGAAAGCACTGCATATTAATCCAGCATAC
ATAAAAGCCAGAATTAGTTTTGGCTATAATTTGCAGGCCCAAGGAAAATTCCAGAAAGCTTGGAACCACT
TTACCATTGCCATAGATACTGATCCAAAGAACTACCTAGCCTATGAAGGAAGAGCTGTGGTCTGTCTTCA
GATGGGTAATAATTTTGCTGCAATGCAGGATATTAATGCTGCCATGAAGATCAGTACTACAGCAGAATTC
TTAACAAATCGTGGGGTGATTCATGAGTTTATGGGCCACAAACAGAATGCAATGAAAGACTACCAAGATG
CAATTACTCTAAACCCCAAGTACTCGCTGGCTTACTTTAATGCAGGAAATATCTACTTTCACCACAGGCA
GTTTTCCCAGGCCAGTGACTACTTCTCAAAAGCTTTAAAATTTGATCCAGAAAATGAATATGTTCTCATG
AATCGAGCTATTACAAATACAATATTAAAGAAATATGAAGAAGCAAAAGAAGATTTTGCAAATGTAATTG
AAAGCTGTCCCTTTTGGGCTGCAGTATATTTTAATAGAGCACATTTCTACTACTGCTTAAAGCAATATGA
ACTAGCTGAGGAAGACCTTAATAAAGCCCTGTCTTTGAAGCCTAATGATGCTCTAGTATATAATTTTAGA
GCAAAAGTTCGTGGTAAAATAGGTCTGATTGAGGAAGCTATGGCTGACTATAACCAAGCACTTGATCTTG
AAGACTATGCCTCAGTTATATGA

Translation (520 aa):
MMKYYDLAKFTIYQIAEMDKGLSELSPMQQALIYSFCENHDKAIEVLDGISWNRAEMTMCALLAKVQMKA
KRTKEAVEVLKKALDAISHSDKGPDATAISADCLYNLGLCYMEEGNLQMTYKLAITDLTTAISMDKNSYT
AFYNRALCYTKIRELQMALTDYGIVLLLDATETVKLNTFLNRGLIYVELGQYGFALEDFKQAALISRTNG
SLCHATAMCHHRINEFEEAVNFFTWALKINPCFLDAYVGRGNSYMEYGHDEATKQAQKDFLKALHINPAY
IKARISFGYNLQAQGKFQKAWNHFTIAIDTDPKNYLAYEGRAVVCLQMGNNFAAMQDINAAMKISTTAEF
LTNRGVIHEFMGHKQNAMKDYQDAITLNPKYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLM
NRAITNTILKKYEEAKEDFANVIESCPFWAAVYFNRAHFYYCLKQYELAEEDLNKALSLKPNDALVYNFR
AKVRGKIGLIEEAMADYNQALDLEDYASVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH