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Report for CCDS5435.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5435.2 Public Homo sapiens 7 ITPRID1 24 110 108 CCDS HistoryNCBI Gene:223075Re-query CCDS DB by CCDS ID:5435.2Re-query CCDS DB by GeneID:223075See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 5435.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407970.7 ENSP00000384416.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407970.7Link to Ensembl Protein Viewer:ENSP00000384416.3Re-query CCDS DB by Nucleotide ID:ENST00000407970Re-query CCDS DB by Protein ID:ENSP00000384416
Original member Current member EBI ENST00000615280.5 ENSP00000478518.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000615280.5Link to Ensembl Protein Viewer:ENSP00000478518.2Re-query CCDS DB by Nucleotide ID:ENST00000615280Re-query CCDS DB by Protein ID:ENSP00000478518
Original member Current member NCBI NM_001257967.3 NP_001244896.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001257967.3Link to Protein Sequence:NP_001244896.2Re-query CCDS DB by Nucleotide ID:NM_001257967Re-query CCDS DB by Protein ID:NP_001244896Link to BLAST:NP_001244896.2
Original member Current member NCBI NM_194300.5 NP_919276.2 Accepted alive Link to Nucleotide Sequence:NM_194300.5Link to Protein Sequence:NP_919276.2Re-query CCDS DB by Nucleotide ID:NM_194300Re-query CCDS DB by Protein ID:NP_919276Link to BLAST:NP_919276.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244896.2 1044 Q6ZRS4-1 1044 100% 0 0
NP_919276.2 1044 Q6ZRS4-1 1044 100% 0 0

Chromosomal Locations for CCDS 5435.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 31553025 31553187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31554475 31554523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31554858 31554901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31569758 31569809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31572102 31572188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31574540 31574742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31577863 31578434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31583134 31583191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31642176 31642258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31642682 31643953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31651142 31651269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31651939 31652050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 31652518 31652829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3135 nt):
ATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGAGAGATCC
TGAAGTGCACCAAAAGCGCGTGGGCTCCGCTGGATGAGTGGCTGCCCCCTGACCCTGAGGAGGAAAGCCA
GAGTCTCACCATCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTC
TTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGTTTCTTTGTATGAACAAGGGATGG
TTCAAATGACTGTGAAAGACTACATGAGATCTTTGCATCAGTTTTCAGAAACTCCCATCCTATCCAGAGG
GACCAGTTTCAACTCTTGCTATTCTACTGCAAGTGTACCACAAAGCATTCCTGAATGGCTGGAATTTTGG
GAGATAGATCCAGTGGAGATTCTCTTGGATCTGGGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAAA
TCCCAGCCAGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTCTTGAAGCTCA
AAAGCAGCGAATGGACATTGAGAACCCCAACTTGTACGGTCGTTTCCGACAGCTGGAAATCCTGGACCAT
GTGACCAATGCCTTCTCATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAGAAAGCTG
GAGGAGAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTT
AAGGAGAGCTTCCAAACAGAACATCAGGCGGGATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTGAAG
GATGAAGTTTTTGTTCCCTTTACAAAACCATGGGATTGTGGAGCAGAGCTAGCAGCAACCTCAATCAACC
ACAAGCAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCTCTCCAAGCCTGTGATGATTTGCTACCTTA
TCCTCCTCATGGTCTTCTGAGCAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCC
TGTGTGTCTGAGGGGTCAGTCAAGGGCAGAACTCAGAAGGAGAACTTATTTCAGACTAACAAGCTCAAGA
GCTTGTCTCATCTTGCAGGCAAAGGACCAGACTCATTTGAAATGGAAGAGGTCCAAAGCTTTGAAGAAGA
GACTGGTAATCCTCTTGACATGACTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAAATAGCTGCCAG
TCTGACAGCAGCGGGTTCCTGGAGGAGCCGCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCCAAACA
GCCAGAGTCCTGCTGAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGTATCATCCCAGGA
CTGTCAGCTAGAGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCG
AATGCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGC
CACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGA
CAGCCATCTGTGGCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGTCACCAGACCCACAGCCACTTCC
AAATATGATCATCCTCTGGGGTTTATGGTAACCCACGTCACAGAAATGCAGGACAGTTTTGTGAGGCCTG
AGGGAGCTGGCAAAGTGCAAAGCCACCACAATGAGTCTCAAAGGTCACCTGGAAATGATCATACTCAAGA
CAAGTTCCTTCATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTCACACCAAC
CACAGCTTACTCGTACCAGAAAGCTCATCACAGTGTATCCCCAAGCACAGTGAAATCACACCTTATGCAA
CTGACCTTGCTCAAACATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGATCCTGCCCAGGT
GAAGTCAAGGTCTGGTACTTTGGGTCAGATACTACCTGGGACAGAAGCTGAGATGGAAAACCTTCCTCTA
AATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTCAGAGGGCTG
TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAGAATGCACTGTGTGTGATCCTGTTACCGCAACAGA
AACAAGACTGGGGACAAAAGCAAGACAGTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAGCAACAAG
ACCTTGACACATGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGACTCAGGCTTCTCTAGTATCTGCC
CAATGGGCACCTGCCATGCTATACCTGCCCACTGCTGCATCTGCTGTCATCACCACCCTCACTGCCACGG
GGAGAGGCAAAGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACTAACTGGTCACCAG
GAAGCCCAGTTCATGACGACTTTGAAAGCCCTTCAGGACACTACAGTGAGGGAGCTATGTTCCTGCACAG
TCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCA
CCTTATGGGACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGGAGGAAAGGGAGGAGGCCGAGCAACTG
CAAACGTTACGTGAGGCCCTGAGGCAGCAGGTGGCAGAGTTGGAATTTCAGTTAGGAGACCGGGCTCAGC
AAATCAGAGAAGGGATTTTACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACACTATTCAAATCT
GCATCAATATAACTGGATAGAAGAAAGCAATGGGCAGACTTCATGTTCTAAAATCCACCCAGGCATGGCC
CCGAGGACTGTGTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTGGCTGCCT
TCACTCCACCCACCTTGGAGAACAGCACCAGGATGTCTCCTTCATCATCAGCTTGGGCAAAGTTAGGTCC
AACCCCTTTGTCAAATTGTCCTGTTGGAGAAAAGGATGCAGATGTCTTCCTCTAG

Translation (1044 aa):
MMAQKSQGSDNLQEGQEKSKREILKCTKSAWAPLDEWLPPDPEEESQSLTIPMLEDSKQESIQQWLDSGF
FVSANENFQQVIDRTVSLYEQGMVQMTVKDYMRSLHQFSETPILSRGTSFNSCYSTASVPQSIPEWLEFW
EIDPVEILLDLGFGADEPDICMQIPARFLGCGSAARGINIRVFLEAQKQRMDIENPNLYGRFRQLEILDH
VTNAFSSLLSDVSILPNRAEEKAGGESVQRTSVSAAKEHRRRMGKLLRRASKQNIRRDCNPEVSESFKVK
DEVFVPFTKPWDCGAELAATSINHKQNHLSLSVEHQSLQACDDLLPYPPHGLLSKQWPCSSMPAKQAPPS
CVSEGSVKGRTQKENLFQTNKLKSLSHLAGKGPDSFEMEEVQSFEEETGNPLDMTSGTVGARVDRANSCQ
SDSSGFLEEPLEPLPLQMPSLPNSQSPAENGGRKPRDQSHSLVSSQDCQLESDGPDSKSRASMSFSSQEA
NALEQRASVSVMEEEFLLEAMEGPPELYIPDMACAKTTTRGECPRKDSHLWQLLPMPHAEYEVTRPTATS
KYDHPLGFMVTHVTEMQDSFVRPEGAGKVQSHHNESQRSPGNDHTQDKFLHVDSEAPREEESSGFCPHTN
HSLLVPESSSQCIPKHSEITPYATDLAQTSEKLIPHLHKLPGDPAQVKSRSGTLGQILPGTEAEMENLPL
NTGSSRSVMTQMSSSLVSAAQRAVALGTGPRGTSLECTVCDPVTATETRLGTKARQLNDASIQTSALSNK
TLTHGPQPLTKSVSLDSGFSSICPMGTCHAIPAHCCICCHHHPHCHGERQSPGPEPSVCRHCLCSLTGHQ
EAQFMTTLKALQDTTVRELCSCTVHEMEAMKTICQSFREYLEEIEQHLMGQQALFSRDMSEEEREEAEQL
QTLREALRQQVAELEFQLGDRAQQIREGILLQLEVLTAEPPEHYSNLHQYNWIEESNGQTSCSKIHPGMA
PRTVFPPDDGQEAPCSGGTQLAAFTPPTLENSTRMSPSSSAWAKLGPTPLSNCPVGEKDADVFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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