NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3672.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3672.2 Public Homo sapiens 4 GSTCD 24 110 108 CCDS HistoryNCBI Gene:79807Re-query CCDS DB by CCDS ID:3672.2Re-query CCDS DB by GeneID:79807See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3672.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394730.7 ENSP00000378218.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394730.7Link to Ensembl Protein Viewer:ENSP00000378218.3Re-query CCDS DB by Nucleotide ID:ENST00000394730Re-query CCDS DB by Protein ID:ENSP00000378218
Original member Current member NCBI NM_024751.3 NP_079027.2 Accepted alive Link to Nucleotide Sequence:NM_024751.3Link to Protein Sequence:NP_079027.2Re-query CCDS DB by Nucleotide ID:NM_024751Re-query CCDS DB by Protein ID:NP_079027Link to BLAST:NP_079027.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079027.2 546 Q8NEC7-3 546 100% 0 0

Chromosomal Locations for CCDS 3672.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 105717614 105717778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105719060 105719527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105726579 105726830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105729406 105729499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105822954 105823069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105823231 105823275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105825672 105825800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105834461 105834594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105837859 105837889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105842065 105842134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 105845441 105845577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1641 nt):
ATGAAAGCCATAAAGAAAAGTCTTACAGAAGAAGAATACCTGTACCTGGACTTTTCTCACCAAACAGAAG
GATGCATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGTTATCTTACTGTGACTGTAAAATCTTTAA
AATTTGCTTAGTTGTCACCAAAGAGGTTAGTCAGTGGACCAGGCTATGTGAACTCACCATCCCTTTGGCT
ATTGAGAATTTTCTCAGAGAATCTTCTGACCAGCCCCCAACTATACCTGTAGAAATACTACAGCTAGAGA
AAAAGCTTAGTGAGCCTGTTAGAGTGCATAATGATGATAAACTCCGCAGGCAGAAGCTCAAGCAACAGAA
GGCTGATGGAGTTGGGCCTCCCCTTACTAAGGGAAAGGCAAAGAGCAAGGTCCACACACAGGAAACATCT
GAAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAAAGTGGCATTCTCAAAGCTCACAGTACAGGAAG
AACCAGCTACTACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAAAGCCTCCGACCTTCCACCTCTGGA
GCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTGTGCTCTTGCCCTGTATCCATCATTTC
TTGGTAATTATCAGCAGGAAATTTTCTGAGAAGCTGGTAGAATTTCCATTGCTAGCCTCTTGGTACCAGA
GGATTCAGGAAGTGCCAGGAGTAAAAACAGCAGCTTCTAAGTGTGGGATCCAATTTCTCCATTTACCAAA
GTTGTTGACAACCTCAACTGAACAGCATCCAAACTTATGTGAAGTCCCAGGTGTAGAAGAGCAAAGCGAT
CCTTTATTTATAGGAGGACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGGCATTGAAGTGATGTTTT
CTCCCCACCCTTGCCCTACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAAGG
TAAAATGTCCAGTGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAAT
CAGGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATGTTGGAATTGTCCTTGCTC
ACATGCTGCCATCATGTCAGGTTACATTAATAGAAAACAAGGAATTATCATTAATTCGTGCTAAGAAGAG
AAGTGATGAACTGGGTTTAAGCAACATTTGGTTCATTCAAGCAAATATGGAATATTTTACTGGGATGTTT
AATATTGGAGTAGCATTGCATGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACAC
GGGCTTCCTTCGTCACATGCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAAAGTTCAATTTTCCAAA
AAGTGAACAATTCAAGAAAACTTTATCATACAAGGAACACATGATTCTGTGCAGATTTGCAGACCAGACA
GCTGTCCAGCTCCCACCCCAACGAAGGCTCATAGGAAAACAGTGCATGTGCTTGGTGGATCTGGATCGAG
CAAGAGCTGCAGAAGAATGTGGATACTCCGTTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAA
AAATAACATGATTGTGGGAGTCCCCATTTAA

Translation (546 aa):
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWTRLCELTIPLA
IENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETS
EGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHF
LVIISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSD
PLFIGGPRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTN
QAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNIWFIQANMEYFTGMF
NIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQT
AVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPKNNMIVGVPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH