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Report for CCDS52157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52157.1 Public Mus musculus 7 Cyp2t4 23 108 98 CCDS HistoryNCBI Gene:384724Re-query CCDS DB by CCDS ID:52157.1Re-query CCDS DB by GeneID:384724See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 52157.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164093.7 ENSMUSP00000126779.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164093.7Link to Ensembl Protein Viewer:ENSMUSP00000126779.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164093Re-query CCDS DB by Protein ID:ENSMUSP00000126779
Original member Current member NCBI NM_001100184.1 NP_001093654.1 Accepted alive Link to Nucleotide Sequence:NM_001100184.1Link to Protein Sequence:NP_001093654.1Re-query CCDS DB by Nucleotide ID:NM_001100184Re-query CCDS DB by Protein ID:NP_001093654Link to BLAST:NP_001093654.1

Chromosomal Locations for CCDS 52157.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27153714 27153732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27155116 27155303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27155633 27155795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27156157 27156306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27156516 27156676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27157218 27157394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27157471 27157612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27157714 27157901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27158152 27158293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27158383 27158564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGAAAGAGCCAGGCACGACAGGATGGTCACCTGCTTGGCGTTGCTGCTGCTGCTGCTGATTCTAATGC
TGTTGCTTTGGTGGGGTGGGGTGGTCCGCCGCCAAGCTCAGATGCAGAAAGACTTACCCCCAGGGCCCGC
ACCTCTCCCGTTGCTGGGGAACTTGCTACAACTACAGTCTGGAGACTTGGACCGTGTGCTCATGGAGCTC
TCCAGCCACTGGGGCCCAGTGTTCACTGTATGGCTGGGCCCGCTCCCTGCAGTGGTGCTGTGCGGCTATG
AGGCGCTCCGAGATGCATTAGTACTGCAAGCAGATGCGTTCTCCGGCCGCGGGGCCATGGCTGTCTTCGA
TCGCTTCACCTGCGGAAACGGCATAGTGTTTTCTAACGGGCCGCGTTGGCACTCGCTTCGCAACTTTGCA
CTTGGAGTGCTGAGGGAGCTTGGCGTGGGTAGGAGTACCATTGAGGATCGCATCCTGGAGGAGGCAGCAT
GTGTGCTGGATGAATTTCAAGCTACCATGGGAGCTCCATTTGACCCCCAGCAGCTACTGGATAGTGCTGT
ATCCAATGTCATTTGTACTGTGGTTTTCGGAAAGCGCTATGACTATGGGGACCCAGAGTTCCGGAGGCTC
CTAAACCTCTTCAGTGACAATTTCTGTATCATGAGTTCCCGATGGGCTGAGATATATAATATGTTCCCAT
CCTTCATGGACTGGATCCCTGGGCCCCACAACCGAATATTTAAAAACTTCCAAGAGCTCCGACTCTTCAT
CTCTGAGCAAATTCAGTGGCACTGGCAGTCACGACAGACTGGGGAACCCCGTGACTTCATTGATTGTTTC
CTCGACCAAATGGATAAGGAACAGCAGGACCTGGAAAGCCATTTCCAGGATGAGACACTGGTGATGACTA
CTCACGATCTTTTCTTTGGTGGCACTGAAACCACAAGCACTACTCTACGTTATGGGCTCCTCATTATGCT
CAAGTACCCTGAGGTGGCAGCCAAGGTGCAAGAGGAGCTGGACGCCACTGTAGGTCGGACCTGGGCCCCT
AGAATAGAGGACCGTGCCCGCTTGCCTTACACCAATGCGGTGCTACATGAGATCCAGCGTTTCATCAGTG
TGCTACCACTGGGGCTGCCCCGGGCCCTCACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGG
CACATTCGTGATTCCCCTACTTGTGTCTGCACACCGGGATCCCACCCAATTCAAGGACCCTGACCATTTC
AATCCCACCAATTTCCTGGATGACCATGGCGAGTTCCAGAACAACGATGCCTTCATGCCCTTTGCCTTAG
GAAAGCGGATGTGCCTGGGTGCTGGCCTAGCCCGTTCCGAGATCTTCCTCTTCCTGACGGCTATCCTGCA
GAAGTTCTCCCTGCTCCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGT
AATGTGCCCCCAGCCTTCCAGCTCCGCTTGGTGGCCCGCTGA

Translation (503 aa):
MERARHDRMVTCLALLLLLLILMLLLWWGGVVRRQAQMQKDLPPGPAPLPLLGNLLQLQSGDLDRVLMEL
SSHWGPVFTVWLGPLPAVVLCGYEALRDALVLQADAFSGRGAMAVFDRFTCGNGIVFSNGPRWHSLRNFA
LGVLRELGVGRSTIEDRILEEAACVLDEFQATMGAPFDPQQLLDSAVSNVICTVVFGKRYDYGDPEFRRL
LNLFSDNFCIMSSRWAEIYNMFPSFMDWIPGPHNRIFKNFQELRLFISEQIQWHWQSRQTGEPRDFIDCF
LDQMDKEQQDLESHFQDETLVMTTHDLFFGGTETTSTTLRYGLLIMLKYPEVAAKVQEELDATVGRTWAP
RIEDRARLPYTNAVLHEIQRFISVLPLGLPRALTRDVNLKNHFLHKGTFVIPLLVSAHRDPTQFKDPDHF
NPTNFLDDHGEFQNNDAFMPFALGKRMCLGAGLARSEIFLFLTAILQKFSLLPVGSPANINLNPQCTGLG
NVPPAFQLRLVAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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