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Report for CCDS9760.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9760.1 Public Homo sapiens 14 SGPP1 24 110 108 CCDS HistoryNCBI Gene:81537Re-query CCDS DB by CCDS ID:9760.1Re-query CCDS DB by GeneID:81537See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9760.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247225.7 ENSP00000247225.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247225.7Link to Ensembl Protein Viewer:ENSP00000247225.6Re-query CCDS DB by Nucleotide ID:ENST00000247225Re-query CCDS DB by Protein ID:ENSP00000247225
Original member Current member NCBI NM_030791.4 NP_110418.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030791.4Link to Protein Sequence:NP_110418.1Re-query CCDS DB by Nucleotide ID:NM_030791Re-query CCDS DB by Protein ID:NP_110418Link to BLAST:NP_110418.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110418.1 441 Q9BX95 441 100% 0 0

Chromosomal Locations for CCDS 9760.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63686105 63686656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63698569 63698658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63727261 63727944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGTCGCTGAGGCAGCGCCTGGCCCAGCTGGTTGGCCGTCTGCAGGACCCGCAGAAAGTGGCCCGTTTCC
AGCGGCTGTGCGGGGTGGAAGCGCCGCCGCGCCGCTCAGCAGACCGGAGGGAGGATGAGAAAGCGGAGGC
GCCTCTCGCCGGAGACCCTCGACTGCGAGGGCGGCAGCCAGGGGCGCCTGGAGGCCCCCAGCCTCCCGGG
AGCGACCGCAATCAGTGCCCGGCCAAGCCGGACGGCGGCGGCGCCCCCAACGGCGTGCGGAACGGGCTGG
CGGCCGAGCTGGGCCCGGCCTCGCCGCGGCGCGCGGGCGCTCTGCGCCGCAACTCGCTGACGGGCGAGGA
GGGCCAGCTGGCCCGCGTGAGCAACTGGCCGCTCTACTGCCTGTTCTGCTTCGGCACGGAGCTGGGCAAC
GAACTCTTCTACATCCTGTTCTTCCCCTTCTGGATCTGGAACCTGGACCCTCTGGTGGGCCGGAGGCTCG
TGGTCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCGAGGCCCGC
CTCGCCGCCCGTGGTCAAGTTGGAGGTCTTCTACAACTCTGAGTACAGCATGCCCTCCACCCATGCCATG
TCCGGCACCGCCATCCCCATTTCTATGGTCCTCCTCACCTATGGCCGCTGGCAGTACCCTCTTATATATG
GACTGATTCTTATTCCCTGCTGGTGTTCTCTAGTTTGCCTAAGTAGAATTTACATGGGAATGCACTCTAT
TCTGGATATTATTGCTGGATTCCTATATACCATTTTAATCTTAGCTGTCTTCTATCCATTTGTGGACCTG
ATTGACAACTTCAACCAAACTCACAAATATGCTCCATTCATCATCATCGGGCTTCATTTAGCTTTGGGGA
TCTTTTCTTTCACTCTTGACACCTGGAGCACATCCCGAGGAGACACAGCCGAGATACTAGGAAGTGGTGC
TGGAATTGCATGTGGATCTCATGTTACTTATAACATGGGTCTAGTATTAGATCCTTCTCTAGATACATTA
CCTTTAGCTGGGCCCCCCATTACTGTGACTCTGTTTGGAAAAGCCATATTGCGGATCCTCATAGGGATGG
TATTTGTACTAATAATCAGAGATGTAATGAAAAAGATCACCATTCCTTTAGCCTGCAAAATCTTCAATAT
ACCGTGTGATGATATTCGAAAAGCAAGACAGCACATGGAAGTTGAACTTCCTTATCGGTATATTACCTAT
GGAATGGTTGGTTTCTCCATCACATTTTTTGTTCCTTACATATTTTTCTTTATTGGTATCTCTTGA

Translation (441 aa):
MSLRQRLAQLVGRLQDPQKVARFQRLCGVEAPPRRSADRREDEKAEAPLAGDPRLRGRQPGAPGGPQPPG
SDRNQCPAKPDGGGAPNGVRNGLAAELGPASPRRAGALRRNSLTGEEGQLARVSNWPLYCLFCFGTELGN
ELFYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRPASPPVVKLEVFYNSEYSMPSTHAM
SGTAIPISMVLLTYGRWQYPLIYGLILIPCWCSLVCLSRIYMGMHSILDIIAGFLYTILILAVFYPFVDL
IDNFNQTHKYAPFIIIGLHLALGIFSFTLDTWSTSRGDTAEILGSGAGIACGSHVTYNMGLVLDPSLDTL
PLAGPPITVTLFGKAILRILIGMVFVLIIRDVMKKITIPLACKIFNIPCDDIRKARQHMEVELPYRYITY
GMVGFSITFFVPYIFFFIGIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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