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Report for CCDS9909.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9909.1 Public Homo sapiens 14 UBR7 24 110 108 CCDS HistoryNCBI Gene:55148Re-query CCDS DB by CCDS ID:9909.1Re-query CCDS DB by GeneID:55148See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9909.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000013070.11 ENSP00000013070.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000013070.11Link to Ensembl Protein Viewer:ENSP00000013070.6Re-query CCDS DB by Nucleotide ID:ENST00000013070Re-query CCDS DB by Protein ID:ENSP00000013070
Original member Current member NCBI NM_175748.4 NP_786924.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175748.4Link to Protein Sequence:NP_786924.2Re-query CCDS DB by Nucleotide ID:NM_175748Re-query CCDS DB by Protein ID:NP_786924Link to BLAST:NP_786924.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_786924.2 425 Q8N806 425 100% 0 0

Chromosomal Locations for CCDS 9909.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 93207292 93207441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93209824 93209957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93210648 93210708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93212032 93212127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93214929 93214982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93215176 93215281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93218527 93218735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93219212 93219361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93220249 93220411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93222313 93222374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 93226943 93227035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGCCGGAGCCGAGGGCGCCGCTGGGCGGCAGTCGGAGCTGGAGCCCGTGGTATCGTTGGTCGACGTCC
TTGAGGAGGACGAGGAGCTGGAGAATGAGGCGTGCGCTGTCCTGGGCGGCAGCGACTCCGAGAAGTGCTC
CTACTCTCAGGGCTCAGTAAAGAGACAAGCACTATATGCCTGTAGTACCTGCACCCCAGAGGGAGAAGAA
CCAGCAGGAATTTGTTTAGCTTGCAGTTATGAATGTCATGGAAGTCACAAACTATTTGAGCTATACACAA
AAAGAAATTTTCGTTGTGATTGTGGAAACAGCAAGTTTAAAAATTTGGAATGCAAATTACTTCCTGACAA
AGCAAAGGTAAATTCTGGCAATAAGTACAATGACAACTTTTTTGGATTGTACTGCATTTGCAAGAGACCT
TATCCTGATCCTGAAGACGAGATTCCAGATGAGATGATCCAGTGCGTAGTCTGTGAAGACTGGTTCCATG
GAAGGCATCTTGGTGCCATTCCCCCTGAGAGTGGGGATTTTCAGGAGATGGTATGCCAGGCCTGCATGAA
ACGTTGTTCTTTTTTGTGGGCTTATGCTGCACAATTGGCAGTAACCAAAATATCCACTGAGGATGATGGA
TTGGTGCGGAACATTGATGGAATAGGTGATCAGGAAGTTATCAAACCTGAAAATGGAGAGCATCAAGATA
GTACCCTCAAAGAGGATGTTCCAGAACAGGGAAAGGATGATGTCCGGGAGGTTAAAGTAGAGCAGAACAG
TGAACCATGTGCCGGCTCTAGTTCTGAATCTGATCTCCAGACAGTGTTTAAGAATGAAAGCCTCAACGCA
GAATCAAAATCTGGCTGCAAACTTCAGGAGCTTAAAGCTAAGCAGCTTATAAAGAAAGACACTGCCACCT
ATTGGCCCCTGAACTGGCGTAGCAAGTTGTGTACCTGCCAAGACTGTATGAAAATGTATGGAGATCTAGA
TGTCTTATTCCTGACAGATGAATACGACACAGTTCTGGCTTATGAAAACAAAGGGAAGATTGCCCAGGCC
ACTGACAGGAGCGATCCCCTAATGGATACCCTTAGCAGCATGAATAGAGTCCAGCAAGTGGAACTCATTT
GTGAATACAATGATTTGAAGACTGAACTTAAAGACTATCTCAAGAGATTTGCTGATGAAGGCACGGTTGT
TAAGAGAGAGGACATTCAGCAGTTCTTTGAAGAGTTTCAGTCAAAAAAGAGAAGAAGAGTGGATGGGATG
CAGTATTACTGCAGCTAG

Translation (425 aa):
MAGAEGAAGRQSELEPVVSLVDVLEEDEELENEACAVLGGSDSEKCSYSQGSVKRQALYACSTCTPEGEE
PAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRP
YPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKRCSFLWAYAAQLAVTKISTEDDG
LVRNIDGIGDQEVIKPENGEHQDSTLKEDVPEQGKDDVREVKVEQNSEPCAGSSSESDLQTVFKNESLNA
ESKSGCKLQELKAKQLIKKDTATYWPLNWRSKLCTCQDCMKMYGDLDVLFLTDEYDTVLAYENKGKIAQA
TDRSDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGM
QYYCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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