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Report for CCDS11065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11065.1 Public Homo sapiens 17 KIF1C 24 110 108 CCDS HistoryNCBI Gene:10749Re-query CCDS DB by CCDS ID:11065.1Re-query CCDS DB by GeneID:10749See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320785.10 ENSP00000320821.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320785.10Link to Ensembl Protein Viewer:ENSP00000320821.5Re-query CCDS DB by Nucleotide ID:ENST00000320785Re-query CCDS DB by Protein ID:ENSP00000320821
Original member Current member NCBI NM_006612.6 NP_006603.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006612.6Link to Protein Sequence:NP_006603.2Re-query CCDS DB by Nucleotide ID:NM_006612Re-query CCDS DB by Protein ID:NP_006603Link to BLAST:NP_006603.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006603.2 1103 O43896 1103 100% 0 0

Chromosomal Locations for CCDS 11065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 5000247 5000352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5000772 5000848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5001222 5001401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5002059 5002124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5002464 5002642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5002731 5002842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5003612 5003689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5003851 5003916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5003998 5004073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5004567 5004645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5004855 5005000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5006915 5007084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5007263 5007342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5007467 5007542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5013653 5013732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5014743 5014837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5019996 5020079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5020492 5020678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5020806 5020878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5022092 5022709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 5023468 5024151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3312 nt):
ATGGCTGGTGCCTCGGTGAAAGTGGCAGTGAGGGTTCGGCCCTTTAACGCCCGTGAGACCAGCCAGGATG
CCAAGTGTGTGGTCAGCATGCAGGGCAACACCACCTCCATCATCAATCCTAAACAGAGCAAGGATGCCCC
CAAAAGCTTCACCTTTGACTACTCCTACTGGTCACACACTTCGACGGAGGACCCCCAGTTTGCATCTCAG
CAGCAAGTGTATCGGGACATTGGAGAAGAGATGCTGCTCCACGCCTTTGAAGGCTACAACGTGTGCATCT
TTGCCTATGGGCAGACCGGGGCTGGGAAATCCTATACCATGATGGGGCGACAGGAGCCAGGGCAGCAGGG
CATCGTGCCCCAGCTCTGTGAGGACCTCTTCTCTCGCGTTAGTGAGAACCAGAGTGCTCAGCTATCCTAC
TCTGTGGAGGTGAGCTATATGGAGATCTACTGTGAGCGGGTACGAGACCTCTTGAACCCCAAGAGTCGGG
GTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGGCCCGTACGTGCAGGACCTGTCCAAATTGGCTGTGAC
CTCCTACGCAGACATTGCTGACCTCATGGACTGTGGAAATAAAGCACGGACTGTGGCTGCCACCAACATG
AATGAGACCAGCAGCCGTTCCCATGCCGTCTTTACCATCGTCTTCACACAGCGCTGCCATGACCAGCTCA
CGGGGCTGGACTCGGAGAAGGTCAGTAAGATCAGTTTGGTGGACCTTGCTGGGAGTGAGCGAGCCGACTC
CTCAGGGGCCCGGGGCATGCGCCTGAAGGAAGGAGCCAACATCAATAAGTCCCTGACTACACTAGGGAAA
GTGATCTCGGCCCTTGCAGATATGCAATCAAAGAAGCGAAAGTCGGATTTTATCCCCTACAGGGACTCTG
TGCTCACCTGGCTGCTCAAGGAAAATTTGGGGGGGAACTCACGCACAGCCATGATTGCAGCCCTGAGCCC
TGCTGACATCAATTACGAGGAGACTCTCAGCACCCTCAGGTATGCTGACCGCACCAAGCAAATCCGCTGC
AATGCCATCATCAACGAGGACCCTAATGCCCGGCTGATTAGAGAGCTGCAGGAGGAAGTAGCCCGGCTGC
GGGAACTGCTGATGGCTCAGGGACTGTCAGCCTCTGCTCTGGAAGGCCTGAAGACGGAAGAAGGGAGTGT
CAGAGGCGCCCTGCCAGCTGTGTCATCTCCCCCAGCTCCAGTTTCACCCTCATCACCCACCACACATAAT
GGGGAGCTGGAGCCGTCATTCTCCCCCAACACGGAGTCCCAGATTGGGCCTGAGGAAGCCATGGAGAGGC
TGCAGGAGACAGAGAAGATTATAGCTGAGCTGAACGAGACATGGGAGGAGAAGCTACGCAAGACAGAAGC
CCTGAGGATGGAGAGAGAAGCATTGCTGGCTGAGATGGGGGTGGCCGTCCGGGAGGATGGGGGAACTGTG
GGCGTCTTCTCTCCAAAGAAGACTCCCCACCTGGTGAACCTGAACGAAGACCCTCTGATGTCTGAGTGTC
TGCTCTACCACATCAAAGATGGCGTCACCAGGGTCGGCCAAGTAGATATGGACATCAAGCTGACCGGACA
GTTCATTCGGGAGCAACACTGTCTGTTCCGGAGCATCCCCCAGCCAGATGGAGAAGTGGTGGTCACTCTG
GAGCCTTGTGAAGGAGCTGAGACATATGTGAATGGGAAGCTTGTGACGGAGCCGCTGGTGCTGAAGTCAG
GGAATAGGATTGTGATGGGCAAGAACCACGTTTTCCGCTTCAACCACCCGGAGCAGGCAAGGCTGGAACG
GGAACGAGGGGTCCCCCCACCCCCAGGACCGCCCTCTGAGCCAGTCGACTGGAACTTTGCCCAGAAGGAA
CTGCTGGAGCAGCAAGGCATCGACATAAAGCTGGAAATGGAGAAGAGGCTGCAGGATCTGGAGAATCAGT
ACCGGAAAGAAAAGGAAGAAGCCGATCTTCTGCTGGAGCAGCAGCGACTGTATGCAGACTCGGACAGCGG
GGATGACTCTGACAAGCGCTCTTGTGAAGAGAGCTGGAGGCTCATCTCCTCCTTGCGGGAGCAGCTGCCG
CCCACCACGGTCCAGACCATTGTCAAACGCTGTGGTCTGCCCAGCAGTGGCAAGCGCAGGGCCCCTCGCA
GGGTTTATCAGATCCCCCAGCGACGCAGGCTGCAGGGCAAAGACCCCCGCTGGGCCACCATGGCTGACCT
GAAGATGCAGGCGGTGAAGGAGATCTGCTACGAGGTGGCCCTGGCTGACTTCCGCCACGGGCGGGCTGAG
ATTGAGGCCCTGGCCGCCCTCAAGATGCGGGAGCTGTGTCGCACCTATGGCAAGCCAGACGGCCCCGGAG
ACGCCTGGAGGGCTGTGGCCCGGGATGTCTGGGACACTGTAGGCGAGGAGGAAGGAGGTGGAGCTGGCAG
TGGTGGTGGCAGTGAGGAGGGAGCCCGAGGGGCGGAGGTGGAGGACCTCCGGGCCCACATCGACAAGCTG
ACGGGGATTCTGCAGGAGGTGAAGCTGCAGAACAGCAGCAAGGACCGGGAGCTGCAGGCCCTGCGGGACC
GCATGCTCCGCATGGAGAGGGTCATCCCCCTGGCCCAGGATCATGAGGATGAGAATGAAGAAGGTGGTGA
GGTCCCCTGGGCCCCGCCTGAAGGATCAGAGGCAGCAGAGGAGGCAGCCCCCAGTGACCGCATGCCGTCA
GCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGGGTGTCACGGCTCATGGAGGAGGACCCTGCCT
TCCGTCGTGGTCGTCTTCGCTGGCTCAAGCAGGAGCAGCTACGGCTGCAGGGACTGCAGGGCTCTGGGGG
CCGGGGCGGGGGGCTGCGCAGGCCCCCAGCCCGCTTTGTGCCCCCTCACGACTGCAAGCTACGCTTCCCC
TTCAAGAGCAACCCCCAGCACCGGGAGTCTTGGCCAGGGATGGGGAGCGGGGAGGCTCCAACTCCGCTCC
AACCCCCTGAGGAGGTCACTCCCCATCCAGCCACCCCTGCCCGCCGGCCTCCGAGTCCCCGAAGGTCCCA
CCATCCCCGCAGGAACTCCCTGGATGGAGGGGGCCGATCCCGGGGAGCGGGTTCTGCACAGCCTGAACCC
CAGCACTTCCAGCCCAAAAAGCACAACTCTTATCCCCAGCCACCCCAACCCTACCCAGCCCAGCGGCCCC
CAGGGCCCCGCTACCCCCCATACACTACTCCCCCACGAATGAGACGGCAGCGTTCTGCCCCTGACCTCAA
GGAGAGTGGGGCAGCTGTGTGA

Translation (1103 aa):
MAGASVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINPKQSKDAPKSFTFDYSYWSHTSTEDPQFASQ
QQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQQGIVPQLCEDLFSRVSENQSAQLSY
SVEVSYMEIYCERVRDLLNPKSRGSLRVREHPILGPYVQDLSKLAVTSYADIADLMDCGNKARTVAATNM
NETSSRSHAVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGK
VISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRC
NAIINEDPNARLIRELQEEVARLRELLMAQGLSASALEGLKTEEGSVRGALPAVSSPPAPVSPSSPTTHN
GELEPSFSPNTESQIGPEEAMERLQETEKIIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTV
GVFSPKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDMDIKLTGQFIREQHCLFRSIPQPDGEVVVTL
EPCEGAETYVNGKLVTEPLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNFAQKE
LLEQQGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQRLYADSDSGDDSDKRSCEESWRLISSLREQLP
PTTVQTIVKRCGLPSSGKRRAPRRVYQIPQRRRLQGKDPRWATMADLKMQAVKEICYEVALADFRHGRAE
IEALAALKMRELCRTYGKPDGPGDAWRAVARDVWDTVGEEEGGGAGSGGGSEEGARGAEVEDLRAHIDKL
TGILQEVKLQNSSKDRELQALRDRMLRMERVIPLAQDHEDENEEGGEVPWAPPEGSEAAEEAAPSDRMPS
ARPPSPPLSSWERVSRLMEEDPAFRRGRLRWLKQEQLRLQGLQGSGGRGGGLRRPPARFVPPHDCKLRFP
FKSNPQHRESWPGMGSGEAPTPLQPPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSRGAGSAQPEP
QHFQPKKHNSYPQPPQPYPAQRPPGPRYPPYTTPPRMRRQRSAPDLKESGAAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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