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Report for CCDS86481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86481.1 Public Homo sapiens 15 CTXND1 24 110 108 CCDS HistoryNCBI Gene:100996492Re-query CCDS DB by CCDS ID:86481.1Re-query CCDS DB by GeneID:100996492See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000560778.3 ENSP00000489837.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000560778.3Link to Ensembl Protein Viewer:ENSP00000489837.1Re-query CCDS DB by Nucleotide ID:ENST00000560778Re-query CCDS DB by Protein ID:ENSP00000489837
Original member Current member NCBI NM_001352888.2 NP_001339817.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001352888.2Link to Protein Sequence:NP_001339817.1Re-query CCDS DB by Nucleotide ID:NM_001352888Re-query CCDS DB by Protein ID:NP_001339817Link to BLAST:NP_001339817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001339817.1 59 A0A1B0GTU2 59 100% 0 0

Chromosomal Locations for CCDS 86481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80201770 80201949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (180 nt):
ATGGAGGAGCCCACGCCCGAGCCCGTCTATGTCGACGTAGACAAAGGGCTGACCTTGGCCTGCTTCGTCT
TCCTCTGCCTCTTCCTTGTCGTGATGATCATCCGCTGTGCCAAGGTCATCATGGACCCTTACAGCGCCAT
CCCCACATCCACCTGGGAGGAGCAGCACCTGGACGACTGA

Translation (59 aa):
MEEPTPEPVYVDVDKGLTLACFVFLCLFLVVMIIRCAKVIMDPYSAIPTSTWEEQHLDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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