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Report for CCDS4611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4611.1 Public Homo sapiens 6 BTN3A3 24 110 108 CCDS HistoryNCBI Gene:10384Re-query CCDS DB by CCDS ID:4611.1Re-query CCDS DB by GeneID:10384See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4611.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244519.7 ENSP00000244519.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244519.7Link to Ensembl Protein Viewer:ENSP00000244519.2Re-query CCDS DB by Nucleotide ID:ENST00000244519Re-query CCDS DB by Protein ID:ENSP00000244519
Original member Current member NCBI NM_006994.5 NP_008925.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006994.5Link to Protein Sequence:NP_008925.1Re-query CCDS DB by Nucleotide ID:NM_006994Re-query CCDS DB by Protein ID:NP_008925Link to BLAST:NP_008925.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008925.1 584 O00478-1 584 100% 0 0

Chromosomal Locations for CCDS 4611.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 26443575 26443659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26443957 26444304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26445704 26445985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26448248 26448448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26448617 26448637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26448728 26448754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26449662 26449688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26450107 26450133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26451675 26452411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1755 nt):
ATGAAAATGGCAAGTTCCCTGGCTTTCCTTCTGCTCAACTTTCATGTCTCCCTCTTCTTGGTCCAGCTGC
TCACTCCTTGCTCAGCTCAGTTTTCTGTGCTTGGACCCTCTGGGCCCATCCTGGCCATGGTGGGTGAAGA
CGCTGATCTGCCCTGTCACCTGTTCCCGACCATGAGTGCAGAGACCATGGAGCTGAGGTGGGTGAGTTCC
AGCCTAAGGCAGGTGGTGAACGTGTATGCAGATGGAAAGGAAGTGGAAGACAGGCAGAGTGCACCGTATC
GAGGGAGAACTTCGATTCTGCGGGATGGCATCACTGCAGGGAAGGCTGCTCTCCGAATACACAACGTCAC
AGCCTCTGACAGTGGAAAGTACTTGTGTTATTTCCAAGATGGTGACTTCTACGAAAAAGCCCTGGTGGAG
CTGAAGGTTGCAGCATTGGGTTCTGATCTTCACATTGAAGTGAAGGGTTATGAGGATGGAGGGATCCATC
TGGAGTGCAGGTCCACTGGCTGGTACCCCCAACCCCAAATAAAGTGGAGCGACACCAAGGGAGAGAACAT
CCCGGCTGTGGAAGCACCTGTGGTTGCAGATGGAGTGGGCCTGTATGCAGTAGCAGCATCTGTGATCATG
AGAGGCAGCTCTGGTGGGGGTGTATCCTGCATCATCAGAAATTCCCTCCTCGGCCTGGAAAAGACAGCCA
GCATATCCATCGCAGACCCCTTCTTCAGGAGCGCCCAGCCCTGGATCGCGGCCCTGGCAGGGACCCTGCC
TATCTCGTTGCTGCTTCTCGCAGGAGCCAGTTACTTCTTGTGGAGACAACAGAAGGAAAAAATTGCTCTG
TCCAGGGAGACAGAAAGAGAGCGAGAGATGAAAGAAATGGGATACGCTGCAACAGAGCAAGAAATAAGCC
TAAGAGAGAAGCTCCAGGAGGAACTCAAGTGGAGGAAAATCCAGTACATGGCTCGTGGAGAGAAGTCTTT
GGCCTATCATGAATGGAAAATGGCCCTCTTCAAACCTGCGGATGTGATTCTGGATCCAGACACGGCAAAC
GCCATCCTCCTTGTTTCTGAGGACCAGAGGAGTGTGCAGCGTGCTGAAGAGCCGCGGGATCTGCCAGACA
ACCCTGAGAGATTTGAATGGCGTTACTGTGTCCTTGGCTGTGAAAACTTCACATCAGGGAGACATTACTG
GGAGGTGGAAGTGGGGGACAGAAAAGAGTGGCATATTGGGGTATGTAGTAAGAACGTGGAGAGGAAAAAA
GGTTGGGTCAAAATGACACCGGAGAACGGATACTGGACTATGGGCCTGACTGATGGGAATAAGTATCGGG
CTCTCACTGAGCCCAGAACCAACCTGAAACTTCCTGAGCCTCCTAGGAAAGTGGGGATCTTCCTGGACTA
TGAGACTGGAGAGATCTCGTTCTATAATGCCACAGATGGATCTCATATCTACACCTTTCCGCACGCCTCT
TTCTCTGAGCCTCTATATCCTGTTTTCAGAATTTTGACCTTGGAGCCCACTGCCCTGACCATTTGCCCAA
TACCAAAAGAAGTAGAGAGTTCCCCCGATCCTGACCTAGTGCCTGATCATTCCCTGGAGACACCACTGAC
CCCGGGCTTAGCTAATGAAAGTGGGGAGCCTCAGGCTGAAGTAACATCTCTGCTTCTCCCTGCCCACCCT
GGAGCTGAGGTCTCCCCTTCTGCAACAACCAATCAGAACCATAAGCTACAGGCACGCACTGAAGCACTTT
ACTGA

Translation (584 aa):
MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELRWVSS
SLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVE
LKVAALGSDLHIEVKGYEDGGIHLECRSTGWYPQPQIKWSDTKGENIPAVEAPVVADGVGLYAVAASVIM
RGSSGGGVSCIIRNSLLGLEKTASISIADPFFRSAQPWIAALAGTLPISLLLLAGASYFLWRQQKEKIAL
SRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALFKPADVILDPDTAN
AILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYWEVEVGDRKEWHIGVCSKNVERKK
GWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEPPRKVGIFLDYETGEISFYNATDGSHIYTFPHAS
FSEPLYPVFRILTLEPTALTICPIPKEVESSPDPDLVPDHSLETPLTPGLANESGEPQAEVTSLLLPAHP
GAEVSPSATTNQNHKLQARTEALY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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