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Report for CCDS41994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41994.1 Public Homo sapiens 14 TRMT61A 24 110 108 CCDS HistoryNCBI Gene:115708Re-query CCDS DB by CCDS ID:41994.1Re-query CCDS DB by GeneID:115708See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41994.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389749.9 ENSP00000374399.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389749.9Link to Ensembl Protein Viewer:ENSP00000374399.4Re-query CCDS DB by Nucleotide ID:ENST00000389749Re-query CCDS DB by Protein ID:ENSP00000374399
Original member Current member NCBI NM_152307.3 NP_689520.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152307.3Link to Protein Sequence:NP_689520.2Re-query CCDS DB by Nucleotide ID:NM_152307Re-query CCDS DB by Protein ID:NP_689520Link to BLAST:NP_689520.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689520.2 289 Q96FX7 289 100% 0 0

Chromosomal Locations for CCDS 41994.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 103529979 103530309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103532582 103532848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103534550 103534821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (870 nt):
ATGAGCTTCGTGGCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGGTG
CAATGGTGGCGGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGTGTCCTGCGGCACTCAGT
TGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGCCGAGGTGGCTGGGTGTATGTGCTGCAC
CCCACGCCCGAGCTCTGGACGCTGAACCTGCCGCACCGCACGCAGATCCTCTACTCCACAGACATCGCCC
TCATCACCATGATGTTGGAGCTTCGGCCCGGCTCTGTGGTCTGTGAGTCTGGCACCGGCAGTGGCTCTGT
GTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCAGCGG
GCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACG
TGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACATCCCATCACCCTGGGA
GGCCGTGGGCCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGCGCTTCTGCTCCTTCTCACCGTGCATC
GAGCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTGGAGGTGC
TGCCACAGGTCTACAACGTGCGCACTGTCAGCCTGCCACCGCCCGACCTGGGCACAGGCACAGATGGCCC
TGCCGGCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGGGCCACACCGGCTAC
CTGACCTTCGCCACCAAGACCCCAGGCTAG

Translation (289 aa):
MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRGGWVYVLH
PTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQR
AEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCI
EQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGY
LTFATKTPG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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